Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02377 ATGGCCGACGACGGAGCAACCTCGGCGGCGACGAGCCGGAGAAAGCCGTCGTGGAGAGAAAGAGAGAACAACAGAAGAAGAGAAAGACGAAGAAGAGCAATAGCAGCGAAAATATACTCAGGACTTCGAGCTCAGGGGAACTTCAACTTGCCAAAGCACTGCGACAACAACGAAGTTCTGAAAGCTCTCTGCGCAGAAGCTGGTTGGTGCGTAGAAGAAGACGGAACCACTTATCGCAAGGGTTGCAAGCCGCCTCTAGCCAATGGTGCTGGGAGCTCCATGAGAAACATTCCCTTTTCTTCTTCTCAAAATCCAAGTCCTCTTTCTTCATCATTTCCCAGCCCAATTCCTTCATACCAAGTTAGCCCTTCCTCCTCCTCTTTGCCAAGCCCGTTTCGTTTAGATGGGGATAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCGTCCTTGTCTCTTCCTCCTCTCAGGATATCAAACAGTGCCCCTGTGACACCACCTCTTTCATCACCAACATCAAGAAATTCAAAACCAATTCCTACATGGGAGTCTATTGCCAAAGAATCCATGGCCTCCTTCAATTACCCTTTCTTTGCAGCGTCTGCCCCTGCTAGCCCCACGCACCGTCACCTTTACACCCCTCTCACTATTCCAGAATGCGATGAGTCCGATACTTCCATTGGTGAGTCTGGCCAGTGGGTGAAATTCCAAGCATTTGCTCCTTCTGCATCTGTGTTCCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGATTCCGCACAGGATGCCTGATAACTCAATCCAAGTGATGAGGACGAGTTCAGAAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAAAAAATTCATGAAGTGGCATTGGATGATTTAGAGCTCACACTTGGAAGTGGGAAGATCGGCGACTGCAACATTGCGGCGCAAGTCCACTATGCTCACTCTGTGTTTTTCTTCCAACTTTCTTCAACAGAGGGAAAGGAGACACGCAACAAAACTAGCAAAGAGAGAAAGAGAGTTTTGCAGCAGCATCTGTTCCCAGTCGGTGGCAGAACAGCACCACCCTCAATGGATTCCAATTCCAAACCTTCCGCACCACCCCCGAACCCTAACCCTAACCCTAATTCATCACCCTCGGAGAAACACCAGAGAGACCTACTGAACCACGTCGAAGCCTACCTCGCGAAGCGCGACGGCGTGGACAAGCTCCTCAAGATTTCGCGCTACACCGCGAAACTCATCCTCGCCACTTCGCTCCTCCAATCCAACAACCCTACCCTCTCCCACCGCCTAAAATCCTTCGAATCCAGCGTCGGCGTGAGCCGAAAGGCCTTCAGACTCGGTAAATTCGTTCAAGACCTAAACGCCCTCAAAACCACCCATCCCCATTCGAACCTCGATTTGTTCCTCTCCGTCCTCGCCTACGGAGGCGAAGGCTTGTACTACTTCGTGGAGCAGTTCGTCTGGCTCGCGAAATCGGGGCTGATTGATGCCAAGCACTCGCGAAAGTTCCAGAAATTGAGCGCGTGGGCGGAGTTCGTGGGTTACTTCGGGAGCGTGGCACTCAAACTCGGGGATTTGGGTGCGATAGCCCAGGAGGAAGCGTGTTTGAAGTCGAGCGTGGAGATCACGCGCCTGAGAGAGGGTGGGTGTGTTGATGAGGAGGCGCAGTTGGGGAAGTTGAGGGACAAGAAAACGATGAAGAGGCTTTCTGTTGTTCAGGATTTGGCCGATGCGGTTATGGCTTTGGATGATGTTTTGGATGGAAATGGACCGTTTTCGAAACCGGTTTTGATGGCTTCCGCGGGGCTATTGTCTGCGCTTATTAGCACTCACAAGAATTGGGTTTCTTGCTGA 1881 0.5098 MADDGATSAATSRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGSSMRNIPFSSSQNPSPLSSSFPSPIPSYQVSPSSSSLPSPFRLDGDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNSKPIPTWESIAKESMASFNYPFFAASAPASPTHRHLYTPLTIPECDESDTSIGESGQWVKFQAFAPSASVFPTSPTFNLVKPVIPHRMPDNSIQVMRTSSEEFGVQVKPWVGEKIHEVALDDLELTLGSGKIGDCNIAAQVHYAHSVFFFQLSSTEGKETRNKTSKERKRVLQQHLFPVGGRTAPPSMDSNSKPSAPPPNPNPNPNSSPSEKHQRDLLNHVEAYLAKRDGVDKLLKISRYTAKLILATSLLQSNNPTLSHRLKSFESSVGVSRKAFRLGKFVQDLNALKTTHPHSNLDLFLSVLAYGGEGLYYFVEQFVWLAKSGLIDAKHSRKFQKLSAWAEFVGYFGSVALKLGDLGAIAQEEACLKSSVEITRLREGGCVDEEAQLGKLRDKKTMKRLSVVQDLADAVMALDDVLDGNGPFSKPVLMASAGLLSALISTHKNWVSC 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02377 626 MobiDBLite consensus disorder prediction 368 383 - -
Gma17g02377 626 MobiDBLite consensus disorder prediction 14 29 - -
Gma17g02377 626 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 308 IPR033264 GO:0003700|GO:0006351|GO:0009742
Gma17g02377 626 MobiDBLite consensus disorder prediction 336 350 - -
Gma17g02377 626 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 308 - -
Gma17g02377 626 MobiDBLite consensus disorder prediction 87 135 - -
Gma17g02377 626 MobiDBLite consensus disorder prediction 93 131 - -
Gma17g02377 626 Pfam Peroxisomal biogenesis factor 11 (PEX11) 395 623 IPR008733 GO:0005779|GO:0016559
Gma17g02377 626 MobiDBLite consensus disorder prediction 162 181 - -
Gma17g02377 626 MobiDBLite consensus disorder prediction 335 391 - -
Gma17g02377 626 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 151 IPR008540 -
Gma17g02377 626 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02377 Gma-Chr17 41839241 41846199 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gma17g02377 PEX11 1.4e-45 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02377 17 41839241 41846199 Gma17g02377 17 41839241 41846199 ECH
Gma17g02377 17 41839241 41846199 Gma14g00659 14 6460356 6461284 GST