Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02373 ATGGAGTTCATGGTTCGGTGTTGTAGTTCGTGCGCGCTATCCAGATTTCGTTTTAGCCTTCGATTCGCCGTCGTTGTTTTCGAGATTGTATTGATATTGGCATGGTTGGAAGCCAACAATGCAAAGCTCCAAGAACACCAATTTCAATGGGGAGGTTTGGAAGGGAGGATTGAGAACATTGCCTCACACTCTTGCATACATGACCAGATACTTGAACAGAGAAAGCGACCTGGTCACAAGGTTTATTCAGTTACCCCACAGGTATATGAGCCTGGTCTCTCGAAACCACTCCAGCATAAAGGTAGGACATTACTTGGTGTATCAACATCATTGGAGTTGCAAGGGAATGAAAAACAACCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCTGATAGGGATTGCCAAAAAATTGGTGACGTTGTCAAGCTTGGGGAGCCTCCCATGACTTCTCTTCCTGGTTTGCTTTCTTGTAATCCTCTTGCTGATCCTCCAGTCTTTGGTGATTGTTGGTATAACTGCACTTCTGAAGACATTTCAGGAGAGGACAAAAAGCATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGTTTGTTGAGCCTGTCAAGGGTAACTTGAGATTAAGTGGGTACTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCATGAATATGTTGAAGAGGGAGTCTCTGATGCCGACTTAGTTCTCTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCTGTGGCATGTGAACGGGACCAATGGGGCCGTGCTATAGCTGGACATGTTAATGTTGCTCCTCGTCATTTGACAGCTGAGGCAGAGACTTTGCTTTCAGCGACTCTGATACATGAGGTTATGCATGTTCTTGGTTTCGATCCTCATGCCTTTGCTCATTTTAGAGATGAAAGAAAAAGACGCCGTAATAAGGTTACCGAACAAGTAATGGATGAAAAGATTGGGCGAATGGTAACACGTGTGGTGCTTCCACGTGTTGTCATGCATTCTCGACATCATTATGCGGCATTTTCTGGAAATTTTACTGGCTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAGAGACTTCTGATGAATGAGATCATGACTGGTTCTGTGGATACAAGATCTGTAGTTTCAAAAATGACACTAGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGACTTGATTGGGGTCGTAACCAGGGAACTGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAAGGGGCCTATCATTGCAACACAACACAGTTCTCTGGTTGTACGTATAACAGAGAGGCAGAGGGTTACTGCCCAATTCTAACCTACAGCGGAGACCTTCCTCAGTGGGCTCAGTATTTTCCTCAAGCTAATAAAGGAGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGGTCATGTACAGACACTAGCAGTGCAAGGGCGCCTGATAGAATGCTAGGTGAAGTTCGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGAGGTTCTCTGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCAGGCTGGTGGACCCCTTCAGTTTCCTGGCTTTAATGGTAAATTAATCTGCCCTGCATATCATGAGCTCTGTAACACAAATCCAGTGGTTGTGTCTGGGCAATGTCCCAGTGCATGTAATTCCAATGGAGACTGTGTTGATGGAAGGTGCCACTGCTTGCTTGGGTTTCATGGTCATGATTGCAGTAGACGTTCCTGCCCCAGCAATTGCACCGGCAATGGCATGTGCCTCTCCAGTGGAATTTGTGAATGTAAATCTGGCTATACTGGCATTGACTGTTCTACTGCTGTTTGTGACGAGCAATGCAGCCTTCATGGCGGGGTTTGTGATAATGGAGTTTGCGAATTTCGCTGTTCTGACTATGCGGGATACACTTGCCACAACAGCTCCATGCTCTTCTCCAGTCTTTCAGTTTGCAGAAATGTGCTGGGAAATGATATCTCCGGGCAGCATTGTGCTCCCAGTGAATCTAGCATACTACAGCAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCATAGATTATTTCCTGGTGGTGCTAGGAAACTATTTAATATATTTGGAAGCTCCTACTGTGATGAGGCAGCTAAAAGGCTTGCATGCTGGATCTCAATACAAAAGTGTGAGAAGGATGGAGACAACAGGCTACGAGTATGTCATTCCGCTTGTCAGGCTTATAACCTAGCATGTGGAGCTTCACTGGACTGTGGTGACCAAACCCTTTTCAGCAGCGAGGGGGGGGATGAGGGTCTGTGCACTGGCTCTGGTGAAATGAAATTGTCATGGTTTAATCGACTGAGAAATAGTTTTTCTTTGAGAAACAGTTTCTCCAAAGGAATATCTGGCAAAAACGTAACTATATACGCCGCGTTCAAGTCCTCCGAGCACCCCCCGCACTCCCACGCCCACGTTGCAACCGTCCACCAGGCTCACGTCGTAGAAGTCATTGCTGCCGCCGTTACCGGCGGATCCGACCGTGAACACCGGCTCCGGTGCACCTCAGTCCTCCGGCACAGTCTCCGGTTAAGCATTTCCCGTTGTCAGAGTCGTCGAAGATGCACCCGCTCCGGGCCCAGAGCCGGCCGGTGCGGTGAGCTGAACCGATGA 2829 0.4723 MEFMVRCCSSCALSRFRFSLRFAVVVFEIVLILAWLEANNAKLQEHQFQWGGLEGRIENIASHSCIHDQILEQRKRPGHKVYSVTPQVYEPGLSKPLQHKGRTLLGVSTSLELQGNEKQPIRIYLNYDAVGHSPDRDCQKIGDVVKLGEPPMTSLPGLLSCNPLADPPVFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALFVEPVKGNLRLSGYSACGQDGGVQLPHEYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNKVTEQVMDEKIGRMVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSLTQGNGCYQHRCINNSLEVAVDGIWKVCPQAGGPLQFPGFNGKLICPAYHELCNTNPVVVSGQCPSACNSNGDCVDGRCHCLLGFHGHDCSRRSCPSNCTGNGMCLSSGICECKSGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCHNSSMLFSSLSVCRNVLGNDISGQHCAPSESSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCEKDGDNRLRVCHSACQAYNLACGASLDCGDQTLFSSEGGDEGLCTGSGEMKLSWFNRLRNSFSLRNSFSKGISGKNVTIYAAFKSSEHPPHSHAHVATVHQAHVVEVIAAAVTGGSDREHRLRCTSVLRHSLRLSISRCQSRRRCTRSGPRAGRCGELNR 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02373 942 Gene3D Leishmanolysin domain 4 503 598 - -
Gma17g02373 942 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 3 833 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gma17g02373 942 Pfam EGF-like domain 640 667 IPR013111 -
Gma17g02373 942 Gene3D Leishmanolysin domain 3 443 501 - -
Gma17g02373 942 Gene3D Laminin 639 670 - -
Gma17g02373 942 Gene3D Laminin 608 637 - -
Gma17g02373 942 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 3 833 - -
Gma17g02373 942 Pfam Leishmanolysin 175 601 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gma17g02373 942 Gene3D Leishmanolysin , domain 2 314 439 - -
Gma17g02373 942 ProSitePatterns EGF-like domain signature 2. 656 667 IPR000742 -
Gma17g02373 942 ProSitePatterns EGF-like domain signature 1. 656 667 IPR000742 -
Gma17g02373 942 SMART egf_5 608 636 IPR000742 -
Gma17g02373 942 SMART egf_5 639 668 IPR000742 -
Gma17g02373 942 ProSiteProfiles EGF-like domain profile. 636 668 IPR000742 -
Gma17g02373 942 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 114 603 - -
Gma17g02373 942 PRINTS Leishmanolysin (M8) metalloprotease family signature 249 278 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gma17g02373 942 PRINTS Leishmanolysin (M8) metalloprotease family signature 402 431 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gma17g02373 942 Gene3D - 114 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02373 Gma-Chr17 41781935 41791202 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02373 17 41781935 41791202 Gma17g02373 17 41781935 41791202 ECH
Gma17g02373 17 41781935 41791202 Gma14g00663 14 6514331 6522543 GST
Gma17g02373 17 41781935 41791202 Gma04g00323 04 2771247 2779357 PCT
Gma04g00323 04 2771247 2779357 Gma17g02373 17 41781935 41791202 PCT