Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02368 ATGAATCATCATGTTGTGTTTCTCTTCACACTAACCTTGTTTCTTGTTTCTTTTGATGCCAAAGCACAGCAGAATTACACAGGAAATTCAATATTCAGCTGCAAGAATGATGACAAAATGGGGGCTTCACCTTCCTTCCTTTACACTTGCAATGGCCTCAACAAATCCTGCCTGGCCTTCCTCATCTTCAAATCAAAACCTCCTTTCAATTCCATAGCCACAATCTCCAACCTCACATCATCAAACCCAGAAGAGCTTGCAAGAATCAATGATGTCAATGTGCTCAAAGTGTTCCCAACTGGGAAAGAAGTGCTTGTCCCTTTGAACTGTTCTTGCTTAACAAGGGACTATTACCAAGCTGAAACCAACTATGTATTGGGGCAATCCCCAACATATTTGACAGTGGCAAATGATACTTTACAGGGTTTGACCACTTGCGATTCGCTTATGCGTGCTAATCCATACGGGGAACTTGATTTGCATCCCGGCATGGAATTGCACGTGCCACTCAGATGTGCTTGTCCAACATGGCATCAGATCACAAACGGCACCAAGTATTTGCTGACATACTCAGTGAATTGGGGTGATAATATTACAAATATTGCTGCAAGGTTCAATGTAGCAGCAGGTAATGTGGTTGATGCCAATGGTTTTTCCACACAAACACAAACTATTTTTCCATTCACAACTGTTCTGATTCCTTTGCCAAGTGAACCTGTGAGTTCAATGACAAGAATTGTTAGTGATCCACCAGATGTGTCACCTCTTGTTTGCAGCTCCAAAAAGTGCAACTCAAAGAGGAAACTTTACACTGTTATTGCCACCACTGGGGGTTCCATGCTGGTTCTTTGTGTCGTCTTATATGGGGTTTTTCTGTTCAGAAAGAGATCAGCAATGTTCATTAAGCGAGGTGAACAAGGTGAGAAATCAAAGAAGTTGTCTTCAGAAGATATCCGTGGTGAGATAGCAATCATTGAACATCACTCCAAGGTGTACAAGTTTGAGGAAATAGAGAAGGCCACTGAAAACTTTAGTTCAAAGAATAGAATCAAAGGTTCTGTGTATCGTGGGGTATTCGGTAAAGAGAAGAACATATTGGCTGTCAAGAAAATGAGAGGGGATGCATCCAAGGAAGTGAATTTGCTGGAAAAGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACGATGGTTGCCCCTATCTTGTTTATGAGTATATGGAAAATGGCTCTTTGAGAGAATGGCTAAGCAGAAACGGGTCAACGGAGCACCAGAGTTTGGCAAGGAGGATCCTGATTGCTCTGGATGTTGCCAATGGTCTTCAGTATCTTCACAACTTCACAGAACCTTGCTATGTGCACAGGAACATAAACAGTGGAAGCATTCTGCTAAACAAAGATCTAAGGGCCAAGATAGCAGACTTTGCTCTTGCTGAAGAATCAGAAAGTAAAATAACTTCCGGTTGTGCCTCATCACACATCGCGAAATCAAGGGGCTATATGGCTCCGGAGTATCTGGAGGCAGGGAAGGTCACTACCAAAATGGATGTTTTTGCCTTCGGAGTGGTGCTGTTGGAATTGATCACGGGTAAAGATGCTGTTACCCTACAAGATGGGAGAGAAGTAATGCTTCGTGCATTCATAGTAAATCTCATTGGTAAAGAGGATGAAGAAGAGAAGGAGAGTTTGTTCATTGATCCGAGCCTCAATGGAAACATTGAGAAAGTATGGGCTCTCCAGCTAGTTAAACTTGGTCTAGCCTGCTTGATCCAGGAATCAGCAGAGAGACCAACCATGGTAGAGGTAGTCTCTAGCTTATTGAAAACATATACAAGTTATATGGAGCAAATAATACCACCTAGCATCAGCAACAGTCCTAGCATGGAGAGGTGA 1902 0.4243 MNHHVVFLFTLTLFLVSFDAKAQQNYTGNSIFSCKNDDKMGASPSFLYTCNGLNKSCLAFLIFKSKPPFNSIATISNLTSSNPEELARINDVNVLKVFPTGKEVLVPLNCSCLTRDYYQAETNYVLGQSPTYLTVANDTLQGLTTCDSLMRANPYGELDLHPGMELHVPLRCACPTWHQITNGTKYLLTYSVNWGDNITNIAARFNVAAGNVVDANGFSTQTQTIFPFTTVLIPLPSEPVSSMTRIVSDPPDVSPLVCSSKKCNSKRKLYTVIATTGGSMLVLCVVLYGVFLFRKRSAMFIKRGEQGEKSKKLSSEDIRGEIAIIEHHSKVYKFEEIEKATENFSSKNRIKGSVYRGVFGKEKNILAVKKMRGDASKEVNLLEKINHFNLIKLQGYCENDGCPYLVYEYMENGSLREWLSRNGSTEHQSLARRILIALDVANGLQYLHNFTEPCYVHRNINSGSILLNKDLRAKIADFALAEESESKITSGCASSHIAKSRGYMAPEYLEAGKVTTKMDVFAFGVVLLELITGKDAVTLQDGREVMLRAFIVNLIGKEDEEEKESLFIDPSLNGNIEKVWALQLVKLGLACLIQESAERPTMVEVVSSLLKTYTSYMEQIIPPSISNSPSMER 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02368 633 Gene3D LysM domain 180 245 IPR036779 -
Gma17g02368 633 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 619 - -
Gma17g02368 633 ProSiteProfiles LysM domain profile. 188 233 IPR018392 -
Gma17g02368 633 ProSiteProfiles Protein kinase domain profile. 295 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02368 633 Gene3D Transferase(Phosphotransferase) domain 1 410 621 - -
Gma17g02368 633 Pfam Protein tyrosine and serine/threonine kinase 363 607 IPR001245 GO:0004672|GO:0006468
Gma17g02368 633 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 1 619 - -
Gma17g02368 633 Pfam LysM domain 190 234 IPR018392 -
Gma17g02368 633 Gene3D Phosphorylase Kinase; domain 1 304 409 - -
Gma17g02368 633 SUPERFAMILY Protein kinase-like (PK-like) 325 621 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02368 Gma-Chr17 41734424 41736325 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma17g02368 PK_Tyr_Ser-Thr 1.6e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02368 17 41734424 41736325 Gma14g00670 14 6580683 6582768 GST