Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02361 ATGGCGAAATCGAGCGCCGACGACGGTGAGCTCCGGCGAGCTTGCGACGCCGCAATTGAGGACCCGAAGCAGAAGATCGTGATGGCGCTGCGCGTCGCCAAGAGTCACGGCATCTTAGGAAAACCTTCCTCCAAGCTCGGTCGCATGGCCAAGCCTAGGGTTCTCGCTCTCTCCACGAAATCCAAGGGGCAGAGGACAACGGCTTTTCTTCGAGTTTTGAAGTATTCTACGGGAGGAGTTCTTGAACCTGCAAAACTATACAAGCTAAAGCACCTGTCAAAAGTGGAAGTTGTAGCAAATGATCCCAGTGGATGTACATTTACTCTGGGATTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCTCAATGGACCATGCGCAATATCGATGACAGGAATCGCCTCCTTCTTTGCATCTTGAACATCTGTAAAGATGTTTTGGGCCGCCTTCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCACCTGTTTCTGCTCAGAATAAAGTGCGAGATGGTGGTCCTGTTGCATCTGTTGTGACTGAAACAGAAATCACAGAATTGAAAGTCAATGTTGAAAAGGAACTTGTTTCGCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAGGAATTTTCTGAAAGGTTGAAGAGAGAGCTCCAGGCTCTGGAAGCTGCAAATGTGCATGCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTGTTGCAAGGACTTGATGCCGCAACCAGTGTTGTGGAAGATATGGATGAATGGTTAAGCATATTCAATGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACTCGCAATAACAACCTGGAAATGCAATCAGTAAATAACAAATCTCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGATTGCGTGTCCCTTCTGAGTATGCCACAAGTTTGACAGGAGGTTCATTTGATGAAGCCCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACCAGTGCCTTGCGTGGTCTTGAAATGCCTAATCTAGACCCTAGTTATGCAAACATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCCTCTGAATTCTTGAGAAATTATTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTAAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAATTGTTTGGGTCCATTGAGGAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGAGAGGCCCGTGAGTTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTTGAAGGTTCCACAGGTTCTGGTCAGAATGTAAATGCTACTGACACTTCCACAGTCTCTGATGCTTATGCAAAGATGCTTACGATTTTCATCCCGCTTCTAGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACACTTGTTCCTCCTGGAGGTGTTGTTAATGGCAACAAAGCTGGATATGATGATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGCAAATCTGGTAAAAATTCTGTGGAGCTTGAAGCTTTGAATAAATCACTTAAGGATTTACTTGATGGAATACAAGAAGACTTCTATGCTGTTGTGGATTGGGCTTACAAGATTGACCCTTTACGCTGTATATCAATGCACGGAATAACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTGATTTGCTTCGTGACCTGGAGTCTCGGATATCTATGCAGTTCAACCGATTTGTTGACGAAGCTTGCCATCAAATTGAAAGAAATGAACGCAATGTTCGCCAAATGGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCATAATGTTTGCAACTTTAGAAAAAATTGCACAAACAGATCCAAAGTATGCAGATATTTTCCTTTTTGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCTACTTTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGTACACGCCATATTAGCATGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAAGACTTGATGTTCACTGTTGCACCTGAAGAGATTCCTTTTCAGCTTGGACTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTTGACAAGTCCATTGCTGCGATGTATAAGAAACTGCAAAAGAATTTGACTTCGGAGGAATTGTTACCCTCCTTATGGGACAAATGCAAGAAGGAATTTCTTGATAAGTACGAAAGTTTTGCCCAACTCGTGTCTAAGATTTACCCTACTGAGACGATCCCGTCTGTAGCAGAGATGAGAGACCTTTTAGCTTCCATGTAG 2661 0.431 MAKSSADDGELRRACDAAIEDPKQKIVMALRVAKSHGILGKPSSKLGRMAKPRVLALSTKSKGQRTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVANDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPPVSAQNKVRDGGPVASVVTETEITELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHALLESEPLMDEVLQGLDAATSVVEDMDEWLSIFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYATSLTGGSFDEARMLQNVEACEWLTSALRGLEMPNLDPSYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKAGYDDDDDLGIMDIDENDSKSGKNSVELEALNKSLKDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRDLLRDLESRISMQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVSKIYPTETIPSVAEMRDLLASM 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02361 886 Coils Coil 284 321 - -
Gma17g02361 886 Coils Coil 884 886 - -
Gma17g02361 886 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 50 144 IPR028258 -
Gma17g02361 886 PANTHER SEC3/SYNTAXIN-RELATED 1 886 - -
Gma17g02361 886 Pfam Exocyst complex component Sec3 579 869 IPR019160 GO:0000145|GO:0006887
Gma17g02361 886 Pfam Exocyst complex component Sec3 227 488 IPR019160 GO:0000145|GO:0006887
Gma17g02361 886 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 886 - -
Gma17g02361 886 Coils Coil 577 597 - -
Gma17g02361 886 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Gma17g02361 886 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02361 Gma-Chr17 41664221 41679399 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02361 17 41664221 41679399 Gma17g02361 17 41664221 41679399 ECH
Gma17g02361 17 41664221 41679399 Gma14g00676 14 6645488 6650850 GST
Gma17g02361 17 41664221 41679399 Gma04g00328 04 2808577 2821615 PCT
Gma17g02361 17 41664221 41679399 Gma06g00314 06 2742868 2744583 PCT
Gma04g00328 04 2808577 2821615 Gma17g02361 17 41664221 41679399 PCT
Gma06g00314 06 2742868 2744583 Gma17g02361 17 41664221 41679399 PCT