LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g02358	ATGCTAAGAGACGAAAGCGTGGGTTCTAGAAGCGCCAGGCACAGCGCCACCGCCACCGCCACCGTCTCCAACAAGGTTCTCGTCGCCGTCAAGGCCGAGAAGGTCATCTCCAACACCGCATTAGCCTGGGCTCTCACTCATGTCGCTCACTCCACCGACTCCATCACGCTCCTCGCCGTTTACTCTTCTCACAAAACCGGCAGAAGGTTCTGGAATTTTTCGAGACTGGCCGGAGACTGTACGAACGGACCGGCGGGAAAGTTGCCGGAGCAAATTTCCGATATCTCCGAGTCCTGTGCTCAGATGGTGCTTCAGCTGCACAATCAAATCGAGGTTAGGGTGAAGATTAAGGTGGTCACGGGTACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGCGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTAAAGCATTGCACGGATGAACTCAACTGTAGCATAGTGGTGATGAATGGTTCACAGGCAAAAATCCTCAGGCTTAACTTACGGTCTTCCAATGAACTTCAAACTCCTTTTTTCTCTGCTAACTCTTCACCAGGTATAGAAATTGCAAAGCTAAAAGGCAGAAGATTGAAGCATTCTACCCCAGTGGGTAGCCCTGAAGAAGCAGGTACTTCTGTTACAAGAAACATAGGAGTAAATTCAGTGTCAAGTTCTGACTCGACAACTTCTCTTTTCCTAGTCTATGAACAAAACCCTCTGTACGAGGGTCAGGGCCCTGAGAAAAGAACAGACGAATCAATCAACGAACCAACAAAAGATTTTCATGTCCAGCCACCATTATACTTTGATCTTGAAAGAGATAGCCCTCCCCCTTCATGGACACGTCCAGCATCATCTGTGGCCAGTGATAACAAGACTATATTTTGGATTCCTCAAAACCACAATATTGTAGACAAGTTTCAGAAAACTAAAAACAACAGTGTTATCCAAAGAACTAAATCCCCAACTTCGAAAACTTTACTTGAGAATTTTATACGTTGTGATCAAGAGATATGGACAAATGAACTTGGGTTTGACCAAGCTCAAAGTAGAAGTTATGTCCCCAACTTGGGCATCAGAGATAATAACTCAGTTCCTTTGGGCAGAACTACCTCTATACCTCCTCCCTTATGCTCACAGTGTAAGAATAAAGCACCAGTATTTGGAAAGCCTCCAAAACGGTTTTCTTACAAAGAGCTAGAGGAAGCTACTGATATGTTCTCGGATGAGAATTTTTTGGCTGAAGGTAGATTTGGTGTAGTCCACCAGGGAATACTCAAAGATGGTCAGGTTGTTGCGGTGAAACAGTTGAAGTTTGGTGGTTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGGTTTTGAGCTGTGCACAACACAGAAATGTTGTGCTGTTGATAGGATTTTGTATAGAGAGCAATTTGAGGATATTAGTCTATGAGTACATATGCAACGGATCCTTGGACCTCTACTTATATGGAGATGAGAGTATGCCTTTGGATTGGAACTCACGCTTAAAGATAGCAATTGGAACTGCACGAGGCTTACGCTACCTTCATGAAGATTGTAGAGTTGGGTGTATAGCGCACAGAGACCTTCGACCCAAAAATATTCTCGTAACACATGACTTTGAACCTATGGTGGCTGATTTTGGGCTTGCTAGATGGCACTCAGAATGGAATATAGATACTGAAGATCGCGTTATAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGACGCTGGAAACCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTATTATTAGAGTTAATAACAGGTCGAAGAATTAGCGAGTTGGAACAGTTCAATGGACACTCGTATCTTTCTGAATGGTTTCATCCCATACGCATGTTAGAGCCCGGTCATATCTTACAAAACGTTCGTTCTCTCAAACCATGCTTTGATTCTAAGGAGTCAGTGGAATTTAATCTTCAGTTGCAAGCCATGGCACGGGCTGTTTCGTTGTGTCTACGTGTGGATCCTGATGCAAGACCCCCAATGTCAAAGATCCTGAGAGTGTTGGAAGGGGGTAATCCAGTTCGTCCTATGGGTTTAGACATCAATTCAGTTGGCAACACAAGTGGCCATTTAAGTGGTTTGAAGTCGCACACTCCACCAAAAGGATCTAAAGGGAAATCCCCAAATTGA	2202	0.4441	MLRDESVGSRSARHSATATATVSNKVLVAVKAEKVISNTALAWALTHVAHSTDSITLLAVYSSHKTGRRFWNFSRLAGDCTNGPAGKLPEQISDISESCAQMVLQLHNQIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVKHCTDELNCSIVVMNGSQAKILRLNLRSSNELQTPFFSANSSPGIEIAKLKGRRLKHSTPVGSPEEAGTSVTRNIGVNSVSSSDSTTSLFLVYEQNPLYEGQGPEKRTDESINEPTKDFHVQPPLYFDLERDSPPPSWTRPASSVASDNKTIFWIPQNHNIVDKFQKTKNNSVIQRTKSPTSKTLLENFIRCDQEIWTNELGFDQAQSRSYVPNLGIRDNNSVPLGRTTSIPPPLCSQCKNKAPVFGKPPKRFSYKELEEATDMFSDENFLAEGRFGVVHQGILKDGQVVAVKQLKFGGSQADLDFCREVRVLSCAQHRNVVLLIGFCIESNLRILVYEYICNGSLDLYLYGDESMPLDWNSRLKIAIGTARGLRYLHEDCRVGCIAHRDLRPKNILVTHDFEPMVADFGLARWHSEWNIDTEDRVIGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELITGRRISELEQFNGHSYLSEWFHPIRMLEPGHILQNVRSLKPCFDSKESVEFNLQLQAMARAVSLCLRVDPDARPPMSKILRVLEGGNPVRPMGLDINSVGNTSGHLSGLKSHTPPKGSKGKSPN	733

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma17g02358	733	Gene3D	Transferase(Phosphotransferase) domain 1	490	698	-	-
	Gma17g02358	733	PANTHER	OS01G0253100 PROTEIN	20	725	IPR045271	GO:0004714\|GO:0006468
	Gma17g02358	733	SUPERFAMILY	Protein kinase-like (PK-like)	395	692	IPR011009	-
	Gma17g02358	733	Gene3D	Phosphorylase Kinase; domain 1	383	489	-	-
	Gma17g02358	733	MobiDBLite	consensus disorder prediction	205	232	-	-
	Gma17g02358	733	ProSiteProfiles	Protein kinase domain profile.	414	699	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma17g02358	733	Gene3D	HUPs	10	177	IPR014729	-
	Gma17g02358	733	MobiDBLite	consensus disorder prediction	702	733	-	-
	Gma17g02358	733	Pfam	Protein tyrosine and serine/threonine kinase	418	689	IPR001245	GO:0004672\|GO:0006468
	Gma17g02358	733	MobiDBLite	consensus disorder prediction	212	232	-	-
	Gma17g02358	733	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE	20	725	-	-
	Gma17g02358	733	SMART	tyrkin_6	414	692	IPR020635	GO:0004713\|GO:0006468
	Gma17g02358	733	MobiDBLite	consensus disorder prediction	249	268	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g02358	Gma-Chr17	41611843	41619364	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Gma17g02358		PK_Tyr_Ser-Thr	3.1e-41	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma17g02358	17	41611843	41619364	Gma17g02358	17	41611843	41619364	ECH
	Gma17g02358	17	41611843	41619364	Gma14g00680	14	6705734	6713683	GST