Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02357 ATGTTCACTAATTCACAAACGGTAATGCAAACCTTACTATCATCACCTTCGGCGGAGCCAGACCTCTCCTTAAACATAAGCCCTCCCTCTATTTCAGATTCCGAAGCAGCCAAAGATGTTGTTGGAAGCTTTGGAAAAGTGCTTTACAGTGATATTTGTTCAACTTCTGATTCGGGTAGTAGTGGAGGAAGTGATTTGAGCCACGAGTTCCACAACCTTGGTCATCATCATCATCGTGAGCCCACATTGAAGTTAGGCTTTGGAACCGTGGATTTGAATCCGCATCATCATCAAGTACAAGGTGTTCCAAGAAGCTTCAATCACCACCACCACCTCCTTCAACCTCACATCTATGGCCGCGATTTCAAACGAAGCGCAAGAGTAGTTAATGGGGTCAAAAGAAGCGTTAGAGCTCCTAGGATGAGATGGACCACAACCCTCCATGCCCATTTTGTTCACGCGGTTCAACTTCTTGGCGGCCATGAAAGAGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCATCAGTACTGCAGGTCATGGGCAGACAGATATTGGATTGAACCCAAGGCTAGGGATTAATGTTCATCTGCATGCACCTTCACCTATTTGTGACACACCGAATTTACCAGACCCAATTCAAAATTCACAGAGGACACCGTGGCAATCATCAATAGAGACAAAAACAGACAACAGTAGACAAGAAGAACCCGAAATCGGTTTGACGTATTCTCACCTCAAGGGAAATAATAATAATAATGAAACCATGGTGGATGGGCACAACAATTCTGGAGGGTTGGATTCTTCCCCTTTGTCACGTTCCTCCGAGGCAATGCTTGACCTTGAATTCACCCTTGGAAGGCCCAATTGGCAAAAAGACCACCCCGAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTAG 996 0.4488 MFTNSQTVMQTLLSSPSAEPDLSLNISPPSISDSEAAKDVVGSFGKVLYSDICSTSDSGSSGGSDLSHEFHNLGHHHHREPTLKLGFGTVDLNPHHHQVQGVPRSFNHHHHLLQPHIYGRDFKRSARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGISTAGHGQTDIGLNPRLGINVHLHAPSPICDTPNLPDPIQNSQRTPWQSSIETKTDNSRQEEPEIGLTYSHLKGNNNNNETMVDGHNNSGGLDSSPLSRSSEAMLDLEFTLGRPNWQKDHPESSRELTLLKC 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02357 331 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 331 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gma17g02357 331 MobiDBLite consensus disorder prediction 269 297 - -
Gma17g02357 331 Gene3D - 138 195 - -
Gma17g02357 331 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 331 - -
Gma17g02357 331 MobiDBLite consensus disorder prediction 1 21 - -
Gma17g02357 331 SUPERFAMILY Homeodomain-like 136 193 IPR009057 -
Gma17g02357 331 MobiDBLite consensus disorder prediction 231 297 - -
Gma17g02357 331 MobiDBLite consensus disorder prediction 233 253 - -
Gma17g02357 331 Pfam Myb-like DNA-binding domain 140 191 IPR001005 -
Gma17g02357 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 139 192 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02357 Gma-Chr17 41583495 41588197 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma17g02357 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02357 17 41583495 41588197 Gma17g02357 17 41583495 41588197 ECH
Gma17g02357 17 41583495 41588197 Gma14g00683 14 6732921 6737644 GST
Gma17g02357 17 41583495 41588197 Gma04g00335 04 2862401 2868610 PCT
Gma17g02357 17 41583495 41588197 Gma06g00321 06 2789121 2791664 PCT
Gma04g00335 04 2862401 2868610 Gma17g02357 17 41583495 41588197 PCT
Gma06g00321 06 2789121 2791664 Gma17g02357 17 41583495 41588197 PCT