Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02356 ATGGTGGGCCAAAATTGTGGTGGTTGCCGATCTTGGGAAGAGGACATTTACTGGTCCCACTTTCAGTTCCTCCACTTCGTCCAATTTCTCCGTGCCGATTATGATCAACACCTTGCACTTCCGAAAGCATTTTCAGATAATTTAAAGAAGAAGTTGCCGGAAAATGTGACCCTTAAGGGTCCTGGTGGTGTTGTGTGGAATATAGGGATGACTACTAGAGATGATACCTTGTACTTTGTGCATGGTTGGGAACAATTTGTGAAAGACCACTGTTTGAAAGAGAATGATTTCCTGGTCTTTAAGTACAATGGTGAATCTCAGTTTGATGTTTTAATATTCAATGGAGGGAGCTTGTGTGAGAAGGCAGGTTCTTATTTTGTTCGAAAATGTGGTCACACTGGAATTGAACATGCGGGTGGAAGTCTCAACAAGAAAAGGGACACGGATAATAATTCTTTGGAAGAAGGCAATATCCCTCCTTCAAATGCTGGTGTGGAATGTGCTTTGCATGAGAAATCTGTGCATGCTAATGGTACAAAGGAGCCAATAGATGTACCTCCTGAAACTCCTCCTACTGAAAAGACTTTCAATGCTGGTGTTGAATCTTCTGGTGTGGAGCAATTTACACCTGATGGAGGAGTCACTCTGGTAGCTGTTCCCTCTGAAACTGCTAATGGGAAAAGGATCAGGAACATTGTTTCTGCTGTTAAGCATGTCCAGACCAAGCGGAGGGGAAGACCAGCTAAAGTGCATGTTCGTGAGAGAACACTTGACTGGGTGGCTGCACTAGAAGCTTCTGAACCAATTTCTACGTCTAGAAGTGGAACATATGAGGTATACAAATCAAATAGAAGGCCTGTCACAGATGATGAGACTAAAATGATCGAGTCATTGGCCAAGGCAGCATGCACCGAAGACAGTATATACGTAGTCATGAAACCCTCGCATGTTTACAAGAGATTCTTCGTGTCAATGAGAGGTACATGGATAGGAAAACACATCTCTCCATCATCTCAAGATGTGATTTTGCGCATGGGTAAGGGTGAATGGATTGCCAGATACAGCTACAATAATATTCGTAACAATGGAGGACTTACTGGTGGGTGGAAACATTTTTCTTTGGATAATAACCTTGAAGAGGGTGATGCCTGTGTGTTTAAACCAGCTGGCCAAATGAACAACACTTTTGTCATTGATATGAGCATTTTCAGAGTTGTTCCGGAGACTGTTCCTCTCACTCCAATGTCTCGTGGAACTGGAAGAAGGGGTAGGAAGCAAGCAACAATGAAGTCTATTCAGACACAACTTAGTCCACCATGA 1320 0.4303 MVGQNCGGCRSWEEDIYWSHFQFLHFVQFLRADYDQHLALPKAFSDNLKKKLPENVTLKGPGGVVWNIGMTTRDDTLYFVHGWEQFVKDHCLKENDFLVFKYNGESQFDVLIFNGGSLCEKAGSYFVRKCGHTGIEHAGGSLNKKRDTDNNSLEEGNIPPSNAGVECALHEKSVHANGTKEPIDVPPETPPTEKTFNAGVESSGVEQFTPDGGVTLVAVPSETANGKRIRNIVSAVKHVQTKRRGRPAKVHVRERTLDWVAALEASEPISTSRSGTYEVYKSNRRPVTDDETKMIESLAKAACTEDSIYVVMKPSHVYKRFFVSMRGTWIGKHISPSSQDVILRMGKGEWIARYSYNNIRNNGGLTGGWKHFSLDNNLEEGDACVFKPAGQMNNTFVIDMSIFRVVPETVPLTPMSRGTGRRGRKQATMKSIQTQLSPP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02356 439 CDD B3_DNA 25 114 IPR003340 GO:0003677
Gma17g02356 439 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 6 155 IPR044837 -
Gma17g02356 439 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 256 416 IPR044837 -
Gma17g02356 439 MobiDBLite consensus disorder prediction 137 161 - -
Gma17g02356 439 Gene3D - 287 406 IPR015300 -
Gma17g02356 439 ProSiteProfiles B3 DNA-binding domain profile. 23 116 IPR003340 GO:0003677
Gma17g02356 439 SUPERFAMILY DNA-binding pseudobarrel domain 308 398 IPR015300 -
Gma17g02356 439 MobiDBLite consensus disorder prediction 413 439 - -
Gma17g02356 439 Pfam B3 DNA binding domain 311 398 IPR003340 GO:0003677
Gma17g02356 439 Pfam B3 DNA binding domain 36 113 IPR003340 GO:0003677
Gma17g02356 439 CDD B3_DNA 311 404 IPR003340 GO:0003677
Gma17g02356 439 SUPERFAMILY DNA-binding pseudobarrel domain 20 114 IPR015300 -
Gma17g02356 439 Gene3D - 19 119 IPR015300 -
Gma17g02356 439 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 155 - -
Gma17g02356 439 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 256 416 - -
Gma17g02356 439 ProSiteProfiles B3 DNA-binding domain profile. 349 406 IPR003340 GO:0003677
Gma17g02356 439 SMART B3_2 308 406 IPR003340 GO:0003677
Gma17g02356 439 SMART B3_2 26 116 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02356 Gma-Chr17 41563661 41567154 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma17g02356 B3 1.8e-10 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02356 17 41563661 41567154 Gma14g00684 14 6761963 6765347 GST