Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02338 ATGGAAGCAACGAAAGCACTTGTATCTTCAACTCCATGCGATGATGGACACCTAGTTACCGTGCTTAGTATTGATGGTGGCGGCATTCGAGGAATCATTCCAGGAATTATACTTGGTTTCCTCGAATCAGAGCTTCAGAAGTTAGATGGGAATCATGTAAGATTGGCAGATTATTTTGATGTGATTGCGGGAACAAGTACTGGAGGATTAGTGACTGCAATACTTACTGCTCCAAATGAAAATAACCGACCCTTGTATGCAGCCAAAGATATTAAGAATTTCTACCTTGACCATACCCCAAAAATCTTCCCACAAAATAAGTGCTGGAATTTATTGTCATCTATGGTGAAGTTGACAAGAACTCTGTTTGGACCACAATACAACGGCAAGTATTTGCACAACCTTATTAGGGAAAAACTAGGAGAAACAAAATTGCACCAAACATTGACCAATGTCGTCATCCCAGGATTTGACATCAAGCGCCTTCAACCTACCATCTTTTCCAGCTTCCAGCTCGATCCAACATATCTTCCAGCTCATTCCTTTGAAACCAAAACCCACCATGGTCATGTCATTGGGAAATTCGACCTCATAGACGGTGGCATTGCTGCAAATAACCCGGCATTGGTGGTCATGGCAGAAGTGACGAACCAAATATTCCATGAAGGGCCGTGTGATTGCTTAAATGTGGAACCAATGCAATACGACAGGTTTTTGGTGTTATCATTGGGAACAGGTTCTCAAAAACAAGAAATGAAATATAGGCTGATGAAGCAGCTCAATGGCCCCTTGAGTTGGGTAAGCACAACCAATGGTGGCACCCCTTTGATTGATGCATTTAGTCAAGCCAGTGCTGACATGGTTGACTTTCACATCTCCTCCGTCGTTCGAGCTCTCAATTCTGAGCACAACTACCTTCGAATTCAAGACGATACATTAACTGGGGTTGACAAGGCCACGATGAAGAATTTGGATGATCTCGTCAAAGTTGGGGAATCATTGTTAAAGAAACCAGTTTCAAAGATTAACTTGAAGACTGGCGTTTACGAACCTGTTAAATCTTATCAAACTAACGAAGAAGCCTTGAAGAGGGGGGAAATGATATAA 1107 0.4219 MEATKALVSSTPCDDGHLVTVLSIDGGGIRGIIPGIILGFLESELQKLDGNHVRLADYFDVIAGTSTGGLVTAILTAPNENNRPLYAAKDIKNFYLDHTPKIFPQNKCWNLLSSMVKLTRTLFGPQYNGKYLHNLIREKLGETKLHQTLTNVVIPGFDIKRLQPTIFSSFQLDPTYLPAHSFETKTHHGHVIGKFDLIDGGIAANNPALVVMAEVTNQIFHEGPCDCLNVEPMQYDRFLVLSLGTGSQKQEMKYRLMKQLNGPLSWVSTTNGGTPLIDAFSQASADMVDFHISSVVRALNSEHNYLRIQDDTLTGVDKATMKNLDDLVKVGESLLKKPVSKINLKTGVYEPVKSYQTNEEALKRGEMI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02338 368 PANTHER PATATIN 12 364 - -
Gma17g02338 368 Pfam Patatin-like phospholipase 22 155 IPR002641 GO:0006629
Gma17g02338 368 Gene3D Cytosolic phospholipase A2 catalytic domain 10 366 - -
Gma17g02338 368 PANTHER XYLOSE ISOMERASE 12 364 - -
Gma17g02338 368 SUPERFAMILY FabD/lysophospholipase-like 19 359 IPR016035 -
Gma17g02338 368 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 22 212 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02338 Gma-Chr17 41368267 41371374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02338 12 362 Miscellaneous Gene Families AT2G26560 58.511 1.79e-141 406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02338 17 41368267 41371374 Gma17g02338 17 41368267 41371374 ECH
Gma17g02338 17 41368267 41371374 Gma14g00701 14 7044620 7046454 GST
Gma17g02338 17 41368267 41371374 Gma06g00339 06 2954762 2957881 PCT
Gma06g00339 06 2954762 2957881 Gma17g02338 17 41368267 41371374 PCT