Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02336 ATGGAGAGAGCAAAGTCATCGATTGAACAAATTCAGCCTCCAACTTATGGAAACCTAGTAACCATTCTTAGCATCGATGGGGGTGGTATTAGAGGCATCATCCCCGCTACCATTATTGATTTCCTTGAATCTCAGCTTCAGGAATTGGATGGTCCAGAAGCAAGGCTCGCAGACTATTTTGATGTGATATCAGGAACAAGCACAGGAGGTCTTGTAACCGCTATGATAACTGCTCCAGACAACAATAATCGACCTCTTTTTGCTGCCAAAGATATTAAGCCTTTTTACATGGACCACTGTCCTAAAATTTTCCCACAACATAGATCTCTGGGAGGACCCAAATACGACGGGAAATACCTGCATGAGGTCGTGAGAGAGAAACTCGGGGACATTCACTTGCATGAAACCCTCACCAACGTTATTAAGATGTGGCCTTGCATGGATGCTAAGCTCTCAGACATATGCATCAGCACGTCTGCTGCACCTACTTATCTCCCTGCTCACAATTTCAACAACCATGATTCAAAAGGGAACGTTCACGAATTCAACCTCATTGATGGTGGCGTTTGTGCAAATAACCCGACCTTAGTTGCCATGAACGAAGTTACAAAGCAAATCATTAAGCAAAATTCTGATTTCTTTCCAATCAAGCCTATGGAATATGGTCGATTCCTTATAATTTCAATAGGGACCGGAACATCAAAAACTGAGGAAAAATTCAATGCACAAATGGCAGCCAAATGGGGATTATTGGATTGGCTAACCCAAAGTGGTAGTAATCCTTTAATTGATGTTTTCTCTCAATCCAGTGCAGATATGGTGGATTTTCATTTATCTGCTGTGACTCAAGCACTTAATTCACAAGATAATTACCTTCGAATTCAGGATGACACATTGACTGGGACGGATTCTTCGGTTGACATTGCTACAAAGGAGAACTTGGAAAAACTTTACCAAATTGGAGAAAATCTATTAAAGAAACCGGTCTCTAGGGTCAATTTAGAGAATGGTCTCTTTCAACCACTGAAAAATGGGGAAACCAATGAACATGCTCTCAAAAGGTTTGCAAAAATACTTTCACAAGAGAGGAGACTCCGAGAAATGAGATCCCCAAACACTAAAAAGACCTTCTAG 1134 0.4118 MERAKSSIEQIQPPTYGNLVTILSIDGGGIRGIIPATIIDFLESQLQELDGPEARLADYFDVISGTSTGGLVTAMITAPDNNNRPLFAAKDIKPFYMDHCPKIFPQHRSLGGPKYDGKYLHEVVREKLGDIHLHETLTNVIKMWPCMDAKLSDICISTSAAPTYLPAHNFNNHDSKGNVHEFNLIDGGVCANNPTLVAMNEVTKQIIKQNSDFFPIKPMEYGRFLIISIGTGTSKTEEKFNAQMAAKWGLLDWLTQSGSNPLIDVFSQSSADMVDFHLSAVTQALNSQDNYLRIQDDTLTGTDSSVDIATKENLEKLYQIGENLLKKPVSRVNLENGLFQPLKNGETNEHALKRFAKILSQERRLREMRSPNTKKTF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02336 377 PANTHER XYLOSE ISOMERASE 1 375 - -
Gma17g02336 377 Pfam Patatin-like phospholipase 23 141 IPR002641 GO:0006629
Gma17g02336 377 Gene3D Cytosolic phospholipase A2 catalytic domain 9 371 - -
Gma17g02336 377 PANTHER PATATIN 1 375 - -
Gma17g02336 377 SUPERFAMILY FabD/lysophospholipase-like 18 337 IPR016035 -
Gma17g02336 377 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 199 IPR002641 GO:0006629
Gma17g02336 377 CDD Pat17_isozyme_like 17 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02336 Gma-Chr17 41358765 41361383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02336 11 374 Miscellaneous Gene Families AT2G26560 61.168 1.52e-171 483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02336 17 41358765 41361383 Gma17g02336 17 41358765 41361383 ECH
Gma17g02336 17 41358765 41361383 Gma14g00705 14 7059534 7061368 GST