Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02328 ATGGCTGCCAGGAGTGATCACCAAACGGTTCCTCTTTCGGTGCTCCTGAGGCGCGAATTGGCGAACGAGAAAATTGAGAAGCCTGAGATTGCTCATGGTCAAGCGTGCCAGAGCAAGAAAGGCGAGGATTTGACGCTGCTCAAGACGGAATGCCAGagggtggtgggcgatggggtctctacatactcagtttttgggctatttgatggacacaatggatctgctgctgctatttattctaaggagaatcttctaaataatgttttaagcgcgattcctccagatcttaacagagatgagtggatagcagccttgcccagggctttggttgctggttttgtaaaaactgataaagattttcaagagaaagGCCAAAAATCTGGAACAACTGTCACCTTTGTCATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCGTCCTTGAATCTTCTGATGGTGAGCTTTATTACTTGTCCGCAGATCACAGGCTAGAAACGAATGAAGAAGAgagggtgcggatcacctctagcggtggtgaagttggtcggctaaatacagggggaggtgcagagGTTGGTCCTTTGAGATGTTGGCCTGGTGGTTTGTGTCTCTCACGATCTATTGGAGATATGGATATTGGTGAATTTATTGTACCTGTCCCGTATGTAAAGCAAGTGAAGATGTCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATTCTCTACCTGCAGAAGTAGCCCTTGATTGTTGTCGTGGAATGCCAGCCGATGCTGCTGCACCACATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTAGTTGATATATTACCTCAGGAGAAACCACCTGTTTCTGCGCCACAAACAAAGAGGCCAGTAAAGGGAATGCTCAAGTCCATGTTTCGTAAAAAATCTTCTGAATCATCTTCTTATATTGACAAAGAGTACATGGAGCCAGATGTAGTAGAAGAATTGTACGAGGAAGGATCTGCCATGCTTTCAGAGAGGTTAGATACTAAATATCCAGTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTATGTCAAGTAGAGATAAAACCTGGAGAGGGTATTTCAATACACGAGGGTGCACCCGACTCTCGAAAATTTCGTCCCTGGGACGGACCTTTCCTGTGCTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATCAGGTAGAATTAGCAGTGGAAGTGATGAATGA 1287 0.3535 MAARSDHQTVPLSVLLRRELANEKIEKPEIAHGQACQSKKGEDLTLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYSKENLLNNVLSAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGELYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKMSTAGGRLVICSDGVWDSLPAEVALDCCRGMPADAAAPHIVKEAVQAKGLRDDTTCIVVDILPQEKPPVSAPQTKRPVKGMLKSMFRKKSSESSSYIDKEYMEPDVVEELYEEGSAMLSERLDTKYPVCNMFKLFMCAVCQVEIKPGEGISIHEGAPDSRKFRPWDGPFLCSSCQEKKEAMEGKRSSGRISSGSDE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02328 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Gma17g02328 428 MobiDBLite consensus disorder prediction 409 428 - -
Gma17g02328 428 Gene3D - 30 299 IPR036457 -
Gma17g02328 428 Pfam Protein phosphatase 2C 57 276 IPR001932 -
Gma17g02328 428 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Gma17g02328 428 SUPERFAMILY PP2C-like 39 293 IPR036457 -
Gma17g02328 428 SMART PP2C_4 21 291 IPR001932 -
Gma17g02328 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 423 - -
Gma17g02328 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Gma17g02328 428 CDD PP2Cc 62 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02328 Gma-Chr17 41316917 41321091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02328 1 427 PP2C-type Phosphatase Gene Family AT1G47380 78.271 0.0 713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02328 17 41316917 41321091 Gma17g02328 17 41316917 41321091 ECH
Gma17g02328 17 41316917 41321091 Gma14g00715 14 7111589 7115830 GST
Gma17g02328 17 41316917 41321091 Gma04g00358 04 3065004 3069272 PCT
Gma17g02328 17 41316917 41321091 Gma06g00346 06 3002891 3007128 PCT
Gma04g00358 04 3065004 3069272 Gma17g02328 17 41316917 41321091 PCT
Gma06g00346 06 3002891 3007128 Gma17g02328 17 41316917 41321091 PCT