Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02322 ATGGATGTTTGGAGTCTTCAAAAGTTGGTGAAGACAGCACCATCTAAAGCATTGGTCATCAGAATCAACTTGGTCTGTCTTGCCATCTTTCTGGTCGTCTATGCAACCTTTCTTCTCCGTCCATCTTCATCCGTCTATTTCGAGAATGCAGCCTCCCTTGTCCGGTGCTCCTTGCGTGAGTGCCATCACAAGGGAGAAAAAAGCATAAAGATGAAAGCAGTGTTGGAGAGGAATGAAGATAGGAGGGCAAAGCAGAACGCGAGTAAGATAGAAGTGCCTAGTTTCTTTGGCGAAATGGGGAAAGGAATGAAGATAGGAATGGTGAACATGCAAGAAGATGATGTGAGTGAATGGAGCACCCTTGGAGAAACAAGCCACGTTTATTTCGAGAAAGTGTCACAGTTTTTCAATTGGACAGATTTATTTCCCGAATGGATAGATGAAGAGGAAGAGACCGATGTTCCATCGTGCCCCGAGATACCAATGCCGGAATTCACAGCATATGAAGGCATGGACGTGATCGTGGCCAAGTTGCCTTGCAATTACCCAAAGGAAGGGTGGGGAAGAAACGTTTTCAGGTTACAAGTTCATCTTATTGTGGCAAATTTGGCAGTGAAGAAGGGGAAGAGGGATTGGAATTGGAAGACGAAAGTGGTTTTGTGGAGCAAGTGTAGGCCAATGCTGGAGCTGTTTCGATGCAACGATTTGGTTAAGCAGGAAAATGAGTGGTGGTATTATGAGGTTGATGCAATGAGGTTGGAGCAGAAAGTTTCTTTGCCTGTTGGGTCCTGCAATTTGGCTCTGCCTCTATGGGAACAAGGAATCGACAAGGTGTACGACACGTGGAACCTGGAACAAAGCGTTAAAAGCGAAGCGCGATCAAAACGTGAGGCCTATGCAACAGTGCTCCACTCCTCAGAAGGCTACGTGTGCGGCGCAATAACGCTAGCACAAACCCTGCTCCAAACCGGAACCAAGCGTGACCTAATCCTCCTCCTGGACACCTCCATCTCCGTCGCGAAACGCCGCTCCCTCGAACTCTCCGGCTGGAAGATCCGACTCATAACCCGGATCCGAAATCCGCGGGCCGAGAATGGCACCTACAACGAGTACAACTACAGCAAGTTCCGACTCTGGCAGCTCACGGATTATGAGAGAGTGATCTTCATTGATGCTGACATCATCGTCCTCCGCAACCTTGATATTCTCTTCCACTTCCCACAGATGTCCGCTACTGGTAACGACCAGTCCATCTTCAACTCCGGCATCATGGTACTCGAGCCCTCCAACTGCACATTCCACGTTCTCATGTCGCGCCGCCACGATGTCATCTCCTACAACGGTGGCGACCAGGGTTTCCTGAATGAGATCTTCATGTGGTGGCACAGGCTTCCGCGACGGGTGAACTACTTAAAGAACTTTTGGGCCAACACGACAATAGAGGCAGGTAGGAAAAATGCAATGTTCGGGGCGGAGCCGCCGAAGCTCTACGCGATTCACTATCTAGGGCTAAAGCCATGGCATTGTTATAGGGACTACGACTGCAACTGGGATGTGGAGGATCAGAGAGTGTACGCGAGCGACGTGGCACATCGACGGTGGTGGAAGGTGCACGATGCTATGGACGAGAACTTGCAAAAGCTGTGTAGGTTAACGAGGCAACGAAGAATGGAGTTGAACTGGGAAAGGAGAAAGGCTGGGAAATTAGGGTTGCCAGATATGCATTGGAAGATCAATGTCACGGATCCCAGAAGAGCTGGCTCGATGTTGATTGGCTAG 1779 0.4952 MDVWSLQKLVKTAPSKALVIRINLVCLAIFLVVYATFLLRPSSSVYFENAASLVRCSLRECHHKGEKSIKMKAVLERNEDRRAKQNASKIEVPSFFGEMGKGMKIGMVNMQEDDVSEWSTLGETSHVYFEKVSQFFNWTDLFPEWIDEEEETDVPSCPEIPMPEFTAYEGMDVIVAKLPCNYPKEGWGRNVFRLQVHLIVANLAVKKGKRDWNWKTKVVLWSKCRPMLELFRCNDLVKQENEWWYYEVDAMRLEQKVSLPVGSCNLALPLWEQGIDKVYDTWNLEQSVKSEARSKREAYATVLHSSEGYVCGAITLAQTLLQTGTKRDLILLLDTSISVAKRRSLELSGWKIRLITRIRNPRAENGTYNEYNYSKFRLWQLTDYERVIFIDADIIVLRNLDILFHFPQMSATGNDQSIFNSGIMVLEPSNCTFHVLMSRRHDVISYNGGDQGFLNEIFMWWHRLPRRVNYLKNFWANTTIEAGRKNAMFGAEPPKLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKVHDAMDENLQKLCRLTRQRRMELNWERRKAGKLGLPDMHWKINVTDPRRAGSMLIG 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02322 592 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 586 - -
Gma17g02322 592 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 586 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Gma17g02322 592 CDD GT8_Glycogenin 297 541 - -
Gma17g02322 592 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 295 545 IPR029044 -
Gma17g02322 592 Pfam Glycosyl transferase family 8 302 508 IPR002495 GO:0016757
Gma17g02322 592 SUPERFAMILY Nucleotide-diphospho-sugar transferases 297 546 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02322 Gma-Chr17 41236469 41242501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02322 71 592 Glycosyltransferase AT4G33330 67.420 0.0 750
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02322 17 41236469 41242501 Gma17g02322 17 41236469 41242501 ECH
Gma17g02322 17 41236469 41242501 Gma14g00719 14 7169068 7178734 GST
Gma17g02322 17 41236469 41242501 Gma04g00363 04 3103835 3108152 PCT
Gma04g00363 04 3103835 3108152 Gma17g02322 17 41236469 41242501 PCT