Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02317 ATGGACGGTTACGACGGCACCGTCAGGCTCGGTGCCATCAACCTCAAGCACGATCGCGCCGCCGATTTCGACTCCGCCACCGCCGCCCCCGACGTCTCCGTCTCCTCTCCGGTCACGCGCCAGAAAGCCGCTGCCGCCAAACAATTCATCGAGAATCACTATAAAAACTATCTCCAAGGATTGCAGGATCGCAAAGACAGACGCAGAGCACTTCAGAGGAAAGTGCAAGAATCTCAGGTATCGGCTGAGGAGCAGGAGGAAATGATGAGGAACTTGGAGCGCCGAGAAACTGAGTACATGAGGCTTCAGAGACGTAAAATTGGAATCGATGACTTTGAGCAGTTAACTGTAATTGGGAAAGGTGCTTTCGGTGAGGTGAGGTTATGTCGTGCAAAAGATACAGGAGAGATTTTTGCCATGAAGAAATTGAAGAAGTCGGAGATGCTTAGTCGCGGACAGGTGGAACATGTTCGATCTGAGAGGAACTTGCTGGCAGAGGTTGATAGCAGATGCATAGTCAAACTTCATTATTCATTCCAAGATTCTGATTTCCTCTATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACATTGTTAATGAGGGAAGATATTCTTTCTGAAGATGTTGCTCGCTTCTACATTGCTGAAAGCATTCTTGCTATTCACTCAATACATCAACACAACTATGTACATAGGGATATTAAACCAGATAACCTGATACTAGATAAAAATGGCCATTTGAAGCTTTCAGACTTTGGCTTATGTAAGCCTCTTGATGATAAGTATTCATCAATTTTATTGGAAAATGATGATCTTACCAGTCAAGAATCCACTAGTGAAACTGAAGGATATTCTGTCTCTCCTTGGTTGATGCCAAAGGAACAATTACAGCAGTGGAAACGTAATCGACGTGCATTGGCGTATTCAACTGTTGGAACTCTTGATTACATGGCACCTGAAGTTTTGCTCAAGAAGGGCTATGGAATAGAATGTGATTGGTGGTCTCTTGGGGCGATCATGTATGAGATGCTTATTGGGTATCCTCCATTTTGTTCCGACGATCCAAGGATGGCCTGCCGTAAGATTGTTAACTGGAAAACGTGCCTGAAATTCCCGGACGAACCCAAGATATCAGCTGAAGCAAAGGATCTGATCTGTCGCTTACTATGTGATGTTGACTCAAGACTAGGAACCAGAGGAATCGAAGAAATAAAGGCTCATCCATGGTTCAAGGGTGTTCAGTGGGACATGCTTTATGAATCAGAAGCAGCATATAAACCTACGGTCACTGGGGACTTGGATACTCAAAATTTTGAGAAGTTTCCTGAAGTCGATGGCCCACCATCTGTAACAGCAACTGTTGGACCTTGGCGGAAAATGCTGACATCCAAAGATAACAATTTCATAGGATATACTTTTAAGAAGTCAGACATCCTTAAATCACTTGAAAGTTCAGATGCAGATATCAGAGTAAACGGATCATCGAAAACCCCTTCCTTGATTACCTTGTTAGGTCGGATTGATTTGCAAGACACCATCATACCAGAAAGGAAAGACTGGGCACTGGAATTCATTTCAATCTCCAGAAATCCAATCATTTATGCTAAAAAAGGAAAACCGAATTCTAGGAGTGTCAAAGACCTGTTTGTGCGCATAGCTGCATCAAACAGCAACGAACAAAAAATTAACATGAAGAACAATTTCAGATTAATTAGAACAGAAAAAACTCGAATCAGTTCACCCACACAGGGCATTAGGGAGACAGAATCCACAATGGCTCCAGAGTGGACAGACGAGAAACACAGCATGTATATCAAGTCTATAGAAGCATCTTTCGTTAATCAGTTATATGATTCTAAGCAAATGAAAACTTCATATGACCCTGCTACCACTTCCGGCCAGTTCAAGGTACTACGTGGTGGCTGTTGGCAAAAAATCAATTTTGAGAGAGTGAATCCGCAAACGAGTAGGATTAACCAGTGTCATGACTTGACGGAAAATCCATGGATTCAGCACTACCGATCTTCAAGCAAACAGAGAAGCATAGCAGTTTCATCCCTTCAAGAAAGTGTTACTACCACAAGTAAAGTTGTTGATTTAGGCCAAAGGAAAGGAGTTCCCTCTGGATCAGGACATCTTCATTTGTGTGAATCTCGAGTCTGCCATAAAGATATGCTTTATAGTGATACAGAGATGTCAGACCAGAACTTTGTTGATGAAGAAGTGAAAGGCAAAAAGCAAAATAAAAAGAGCAAGGTGAAACGACAGAGATCTTTGATAAGTGATGCTCAAGACAATGATCAGATGGTCCCCAACAGAAAATCATCTTCTGGTGGAGATTTTACCAAGAATTTTGTTTCTGCTGCTTAG 2376 0.4242 MDGYDGTVRLGAINLKHDRAADFDSATAAPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQRKVQESQVSAEEQEEMMRNLERRETEYMRLQRRKIGIDDFEQLTVIGKGAFGEVRLCRAKDTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLENDDLTSQESTSETEGYSVSPWLMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWKTCLKFPDEPKISAEAKDLICRLLCDVDSRLGTRGIEEIKAHPWFKGVQWDMLYESEAAYKPTVTGDLDTQNFEKFPEVDGPPSVTATVGPWRKMLTSKDNNFIGYTFKKSDILKSLESSDADIRVNGSSKTPSLITLLGRIDLQDTIIPERKDWALEFISISRNPIIYAKKGKPNSRSVKDLFVRIAASNSNEQKINMKNNFRLIRTEKTRISSPTQGIRETESTMAPEWTDEKHSMYIKSIEASFVNQLYDSKQMKTSYDPATTSGQFKVLRGGCWQKINFERVNPQTSRINQCHDLTENPWIQHYRSSSKQRSIAVSSLQESVTTTSKVVDLGQRKGVPSGSGHLHLCESRVCHKDMLYSDTEMSDQNFVDEEVKGKKQNKKSKVKRQRSLISDAQDNDQMVPNRKSSSGGDFTKNFVSAA 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02317 791 CDD STKc_NDR_like 110 476 - -
Gma17g02317 791 Pfam Protein kinase domain 112 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02317 791 SUPERFAMILY Protein kinase-like (PK-like) 87 464 IPR011009 -
Gma17g02317 791 ProSiteProfiles AGC-kinase C-terminal domain profile. 413 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma17g02317 791 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 511 - -
Gma17g02317 791 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Gma17g02317 791 Gene3D Phosphorylase Kinase; domain 1 109 195 - -
Gma17g02317 791 Gene3D Phosphorylase Kinase; domain 1 431 441 - -
Gma17g02317 791 ProSiteProfiles Protein kinase domain profile. 112 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02317 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Gma17g02317 791 SMART pkinase_C_6 413 477 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma17g02317 791 Coils Coil 68 105 - -
Gma17g02317 791 MobiDBLite consensus disorder prediction 743 791 - -
Gma17g02317 791 MobiDBLite consensus disorder prediction 764 791 - -
Gma17g02317 791 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 511 - -
Gma17g02317 791 Gene3D Transferase(Phosphotransferase) domain 1 196 264 - -
Gma17g02317 791 Gene3D Transferase(Phosphotransferase) domain 1 311 430 - -
Gma17g02317 791 Pfam Protein kinase C terminal domain 431 475 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gma17g02317 791 SMART serkin_6 112 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02317 Gma-Chr17 41167642 41181288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02317 1 513 AGC Kinase Gene Family AT5G09890 78.682 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gma17g02317 Pkinase 1.3e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02317 17 41167642 41181288 Gma17g02317 17 41167642 41181288 ECH