Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02316 ATGTCACCCTTCACATGCACTTCATCCATCATACACGAATTCAATTGGAGAAAAGTCACAGCAATTTACGAACACAGCAACTTCTTTGCCTCTCATTCAGAAATATTAACAAGACTCTCATATTCTCTCAGTCTAGTTAATGCTGAAATAGACCACTATGTTGCTTTTCCTTCAATAATAATCACTCTTTCAAACCCAATAGAAAACTACATAGAACAAGAACTTGTAAGGCTCAAGAACAAGAGCAATAGGGTGTTCTTGCTTATTCAATCTTCCTTAGAGTTTTCCACATTGCTATTTGAGAAGGTAAGGCAAATGGGAATGATGGAAGAAGGGTCGGAGTGGATCATCACTGATGATGTAGCTACTCATCTTGATTCATTGGATTCTTCTATCATGTTTAACATGCAAGGTATTATGGGGTGCAAAACCACCTTCATGGAAACGAGTGAAACGTTCAAACGTTTCAAATTTGTGTTTGGGAGGAAGTTCGGATTGGAATACCCTGAAGAGGAAAACTCCCAGTTACCAAGTATCTTTGCTCTTAGGGCCTATGATGCTGTTTGGACCATTGCTCATGCATTGAAGAAATCACAAGGGAACTTTTTTTTCCTTATCAGGAAATATTTTACTGAGAACCTTGTTGAGCATGTGGTGGTGAACACAACAACAACAATTAGTGTTGGTTCTGCTAGAGTGCTTTTAGGTTCTGTGGATTGGCCTGGTGGGTTGAAAACAGTTCCAAAAGGTTGGGCTTACAATAGCACTGAAGGAAGGCCTTTGAAAATTGGGGTTCCAGCAATTGATCCATGCCCTCAGTTTGTGAATGTGAGTCATGATAAGAGACTGAATGAAACCCAATTCACAGGTTTCTCTATCAATGTCTTTGAATCAGTTGTTAAGCGCCGGCCTTATCACCTGCCTTTTGTTTTTGTTCCATTCTATGGCTCTTATGATCAAATAGTTGAACAAGTGAACAATAAGGACCTTGATGCTGCTGTTGGAGATATTCAAGTGGTGGAACATAGATATGCATTTGCGGAATTCTCTCATCCGTATGTTGAATCTGGTATAGCCATGGTGGTGAAAGTAAAGGCAGATAGATCCAAAGAAACCTGGATGTTCATGGACGCTTTTACAAAAGAAATGTGGATGTTGATGGCAGTGATGCACCTGTTCATAGCATTTGTAATATGGTTCATTGAAGGTGAAAACAATTCAGAGTTGAAGAGTCTTGGGGCCATTCTCTGGTTTTCTGTCACCACATTATTCTTTGTACACAGAGAACCTGTGAAGAGCAACTTGGCTCGAGCTGTGCTAGCACCTTGGTTATTTGCTATTCTCATAGTGACTTCAAGTTTTACTGCGAGTCTTTCATCCATGATGACAGTGTCCCATCTTGAACCATCTGTGCCAGATATACAAACACTGCTGGGGACAAACGCAATCATAGGCTGCAACAAGAACACTTTTTTGGCATTCCCAAAAGGCTCAAGTTTAGCAATTGACATATCTCGAGCAACCCTAAAAGCCATAGAAAGTGGAGAAGGGCAAACCCATTGTGGATCAACAGGCAGCAAAATACAAAATGAACAACTAGGCTCTCAACCTTTCTTTGGCCTATTTGCCATTTGTGGAGCCATTGGTCTCTTTGGTTTGTTGGCAACCATTATTCATTTTGTTAACAGGAATGGACATACATTTATGAATTGCATATCATTATTACAGTTACAAAGAGGATTGTAG 1746 0.4003 MSPFTCTSSIIHEFNWRKVTAIYEHSNFFASHSEILTRLSYSLSLVNAEIDHYVAFPSIIITLSNPIENYIEQELVRLKNKSNRVFLLIQSSLEFSTLLFEKVRQMGMMEEGSEWIITDDVATHLDSLDSSIMFNMQGIMGCKTTFMETSETFKRFKFVFGRKFGLEYPEEENSQLPSIFALRAYDAVWTIAHALKKSQGNFFFLIRKYFTENLVEHVVVNTTTTISVGSARVLLGSVDWPGGLKTVPKGWAYNSTEGRPLKIGVPAIDPCPQFVNVSHDKRLNETQFTGFSINVFESVVKRRPYHLPFVFVPFYGSYDQIVEQVNNKDLDAAVGDIQVVEHRYAFAEFSHPYVESGIAMVVKVKADRSKETWMFMDAFTKEMWMLMAVMHLFIAFVIWFIEGENNSELKSLGAILWFSVTTLFFVHREPVKSNLARAVLAPWLFAILIVTSSFTASLSSMMTVSHLEPSVPDIQTLLGTNAIIGCNKNTFLAFPKGSSLAIDISRATLKAIESGEGQTHCGSTGSKIQNEQLGSQPFFGLFAICGAIGLFGLLATIIHFVNRNGHTFMNCISLLQLQRGL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02316 581 Gene3D - 252 370 - -
Gma17g02316 581 Gene3D - 4 164 - -
Gma17g02316 581 Gene3D - 371 493 - -
Gma17g02316 581 SUPERFAMILY Periplasmic binding protein-like II 238 385 - -
Gma17g02316 581 Pfam Bacterial extracellular solute-binding proteins, family 3 285 371 IPR001638 -
Gma17g02316 581 SUPERFAMILY Periplasmic binding protein-like I 8 251 IPR028082 -
Gma17g02316 581 PANTHER GLUTAMATE RECEPTOR 5 491 - -
Gma17g02316 581 PANTHER GLUTAMATE RECEPTOR 492 570 - -
Gma17g02316 581 Pfam Ligand-gated ion channel 381 546 IPR001320 GO:0015276|GO:0016020
Gma17g02316 581 Pfam Receptor family ligand binding region 8 199 IPR001828 -
Gma17g02316 581 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 491 - -
Gma17g02316 581 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 492 570 - -
Gma17g02316 581 SMART GluR_14 262 520 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02316 Gma-Chr17 41160916 41164455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02316 8 492 Ion Channels AT4G31710 26.740 2.47e-58 208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02316 17 41160916 41164455 Gma14g00725 14 7263042 7270407 GST