Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02311 ATGGCTTCCTCCTCCGAAGAACTATTTGGTTTGAATTACCTGCTGCTGAAGCCACAAGAGGCAAGTGCTGTTGATCTTGGACGCCTCTTGTTCTCTTCCAACTTGAAAAACAGAAGATTCATCGAATGCCCAGAAGAGATTGAGGCCAGAGAATTTCGACAAAGATGGCTCCTCTTCATTTCCATTGTCGCGCAGAAGGTCCTCGTTGCATCAAGAAACTCATTGAAGAACGTTGGGGACACGTTGGAGTTGTGGCTCAATCGTCTATCAAGCAATGGAGGCTTAATAAGACTCTTGTTCAACATTCTAACAGGAAAGATGATAACACCGGAGAGATCATCGGCGACATTCTTATCCGTGGTGGGCTACAGTGACACACGAGTTGACTTAGACAAAAGCATTAAGGAGAAGGATACTAAATACAAAGGGTTCCTCTCAATGATGGCTTCAAAATTAGCGTATGAGAATGAAGAATTCGTTAGTAACGCAGTGCGAAATCATTGGGATATGGATTTCTTGGGGTCACACAGCTTCTGGAACGATTACCAAGAGCTCTGGTCCACACGAGCAATCATAGTGCAAGACACCAAGTCCGAACCCAACTTGATTGTGGTTGCATTCAGAGGCACAGAGCCATTTGATGCGGACCAATGGAGAACAGACGTGGACATCTCCTGGTATGAGTTGCCCAACGTGGGTAGGATTCATGGTGGGTTCATGAAAGCCTTAGGTCTTCAAAAGAACACTGGATGGCCCAAAGAGATAATTGATCAAAGCAGCACAAGTGGTGAGCCTCATCATCTTTATGCATACTATACAATCAGAGAGAAACTGAGAGTCATGTTGGAGGCAAAAGAAGATGCAAAATTCATATTGACAGGGCACAGCTTAGGAGGAGCCTTGGCAATTTTGTTTGCTGCAGTGCTCACACTGCATGAGGAGGAATGGTTGTTGAACAAGTTAGAAGGGGTTTATACATTTGGGCAGCCACGAGTTGGGGACTCTCGGTTTGGGGAGTTCATAAAGGACAAGTTGAGAAAGTATGATGTGAGGTATATGAGGTATGTTTACTGCAATGATGTGGTGCCTAGGGTCCCTTATGATGACAAAACTCTCTTCTTTAAGCACTTTGGTGCTTGCCTCTACTTCAACAGCTTGTACCATGGGCAGGTTCTAGAAGAAGAGCCAAACAAGAATTATTTCTCTTTGTTCTGGGTCATACCCAAGATCCTAAACGCAGTTTGGGAGCTTATTAGAGGATTTCTTATCCCATTCATAGAAGGTAGAGGCTATATACAGAATTGGTTCATGACGATGTTCAGACTTGTTGGATTGATAATTCCAGGACTACCAGCTCACCTTCCTACAGATTACGTCAATGTTACTAGATTAGGATCCTTAAACGATTCTCAGGAGCTTCAAAACTCACAAGATTCCAAGGCTGACTGA 1449 0.4396 MASSSEELFGLNYLLLKPQEASAVDLGRLLFSSNLKNRRFIECPEEIEAREFRQRWLLFISIVAQKVLVASRNSLKNVGDTLELWLNRLSSNGGLIRLLFNILTGKMITPERSSATFLSVVGYSDTRVDLDKSIKEKDTKYKGFLSMMASKLAYENEEFVSNAVRNHWDMDFLGSHSFWNDYQELWSTRAIIVQDTKSEPNLIVVAFRGTEPFDADQWRTDVDISWYELPNVGRIHGGFMKALGLQKNTGWPKEIIDQSSTSGEPHHLYAYYTIREKLRVMLEAKEDAKFILTGHSLGGALAILFAAVLTLHEEEWLLNKLEGVYTFGQPRVGDSRFGEFIKDKLRKYDVRYMRYVYCNDVVPRVPYDDKTLFFKHFGACLYFNSLYHGQVLEEEPNKNYFSLFWVIPKILNAVWELIRGFLIPFIEGRGYIQNWFMTMFRLVGLIIPGLPAHLPTDYVNVTRLGSLNDSQELQNSQDSKAD 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02311 482 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 9 475 - -
Gma17g02311 482 Pfam Lipase (class 3) 204 369 IPR002921 GO:0006629
Gma17g02311 482 CDD Lipase_3 145 384 - -
Gma17g02311 482 SUPERFAMILY alpha/beta-Hydrolases 145 389 IPR029058 -
Gma17g02311 482 Gene3D alpha/beta hydrolase 133 407 IPR029058 -
Gma17g02311 482 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 9 475 IPR044819 GO:0004806|GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02311 Gma-Chr17 41120689 41130629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02311 12 475 Acyl Lipid Metabolism Gene Families AT1G56630 55.809 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02311 17 41120689 41130629 Gma17g02311 17 41120689 41130629 ECH
Gma17g02311 17 41120689 41130629 Gma14g00729 14 7296163 7301848 GST