Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02306 ATGGAAGACCACGCGCATGCTGCACTACCTCCCGGTTACCGGTTCTACCCTTCCGAAGAGGTTCTCGTCGGTTACTACTTAACCAAGAAGAACGAGAACCGGGAGGAGGGTTTCTACGGTTCTGATTTGATCAGAGAACTTGACCTCTACGATCACGATCCCTTCGAATTACCGGACGCTGCTGCTTGCTTTTCGTACGGTTACAAAGGGAGGAAGAAGCATTGGTTCTGTTACGCTAAAGAGACCAAACGCAGAAACAGAAGAAAGGTGAAAAGCGGGTTCTGGCTCCGGAAGGGAAAGGTTCGGGATATTTCCGACCACAACGGCGACGACGTCGTTTTGGGCACGAGGACGCGTTTCGTTTTCTACGTCGGCAATTCCCTGAAAAACGCTGCCAGAACCGATTGGATTTTGTACGAATACGCATTGGTTGATCGCTTTCTGGCTTCGTTTGTGCTTTGTCGTGTGGTGAATAAGCCTCCTCATAAGAATAGTCCGTCGGAGATCGGTCTGAGTTGTTGTGCTGAGGAGAGTGTTGTGGCGGTGGTGCGTCACGTTGGTGTTCAGTGTGATGGATGTGCCGAAAGTGATGTTGTTGAAGCTAAGGTGTGTGATGAAGGCTTTGTTAATAGAGAGAATGAGATTGCTGAGAATCCAATTAGTGGTGAACATGGTGATCCAGCTGCACCTGTTTCAGTTGCTCAGGGAAGTCAGCCGgttcaggaaaggctttctaaacttcccagtggcagtgcattgttcgtaggagctatgacatctcagcaacttatgctttccattctagaggaggatttcatagaattggatgatattgcatga 840 0.4238 MEDHAHAALPPGYRFYPSEEVLVGYYLTKKNENREEGFYGSDLIRELDLYDHDPFELPDAAACFSYGYKGRKKHWFCYAKETKRRNRRKVKSGFWLRKGKVRDISDHNGDDVVLGTRTRFVFYVGNSLKNAARTDWILYEYALVDRFLASFVLCRVVNKPPHKNSPSEIGLSCCAEESVVAVVRHVGVQCDGCAESDVVEAKVCDEGFVNRENEIAENPISGEHGDPAAPVSVAQGSQPVQERLSKLPSGSALFVGAMTSQQLMLSILEEDFIELDDIA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02306 279 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Gma17g02306 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 278 - -
Gma17g02306 279 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Gma17g02306 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 6 278 - -
Gma17g02306 279 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Gma17g02306 279 Pfam No apical meristem (NAM) protein 10 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02306 Gma-Chr17 41038650 41041811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02306 7 205 NAC Transcription Factor Family AT1G32510 33.333 1.54e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma17g02306 NAM 1.8e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02306 17 41038650 41041811 Gma17g02306 17 41038650 41041811 ECH
Gma17g02306 17 41038650 41041811 Gma14g00734 14 7402502 7405318 GST