Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02303 ATGAAGGTGCATCAGTTCGCACGTGGATTCTGGGAGCACGAACCCTCCCTCACACTTGGATGCAAACGCTTACGCCCCCTTGCCCCCAAGCTTTCCAACACCGACGACACCATTTCTCCACCTCATCATCATCCTGTTACAACCTTAGACCTCAAGAGCTTCATCAAACCTCAAAGTGCCTCCAGAAAACTTGGAATTGGATCCTCCTCCGATGATAATAATAATAATAATAATAAGAGAGACCCATCTTCACCTCATGGCCAGGTGGAAACTCATATTCCAGGAGGGACACGGTGGAATCCGACGCAAGAACAGATAGGGATATTGGAGATGCTGTATAGAGGAGGTATGCGAACTCCGAATGCTCAACAAATAGAGCAGATCACGGCACAGCTTAGCAAGTACGGCAAGATCGAAGGGAAGAACGTGTTCTACTGGTTCCAAAACCACAAAGCACGCGAGAGACAGAAGCAGAAGCGTAACAACCTAGGCCTTGCTCATAGTCTTCGTACTACTCCCACCACAATAGTGTCACACCCCTTTAGTTGTAGTGTAATAACCACTCTCGACACGACAAAACGGGGTGAAATAGTAGAAAGAGAGGAGGAAGATAGCCCGTTGAAGAAGTGTAGGAGCTGGGCATTTGAGTACTTGGAAGACCAAAGAGAGGAGGAACATAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGACGAAGGGGTTTGTTTTAA 735 0.4776 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDDTISPPHHHPVTTLDLKSFIKPQSASRKLGIGSSSDDNNNNNNKRDPSSPHGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSLRTTPTTIVSHPFSCSVITTLDTTKRGEIVEREEEDSPLKKCRSWAFEYLEDQREEEHRTLELFPLHPEGRRRGLF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02303 244 Pfam Homeodomain 97 156 IPR001356 GO:0003677
Gma17g02303 244 SUPERFAMILY Homeodomain-like 96 161 IPR009057 -
Gma17g02303 244 MobiDBLite consensus disorder prediction 62 84 - -
Gma17g02303 244 CDD homeodomain 97 158 IPR001356 GO:0003677
Gma17g02303 244 ProSiteProfiles 'Homeobox' domain profile. 102 157 IPR001356 GO:0003677
Gma17g02303 244 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 239 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Gma17g02303 244 SMART HOX_1 94 161 IPR001356 GO:0003677
Gma17g02303 244 MobiDBLite consensus disorder prediction 60 101 - -
Gma17g02303 244 Gene3D - 96 163 - -
Gma17g02303 244 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02303 Gma-Chr17 41012249 41013785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02303 1 180 Wox Gene Family AT1G46480 59.574 7.17e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma17g02303 Homeodomain 6.2e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02303 17 41012249 41013785 Gma17g02303 17 41012249 41013785 ECH
Gma17g02303 17 41012249 41013785 Gma14g00736 14 7438499 7440287 GST