Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02301 ATGATGGCGAGACTCGCTCCCCCTTTCAGTATCTTCACACAATCCCATTACTGGCGCCCACTTCTCTCTTCTCACAACGCCAAACACGCCCTAACTGCCGCTACTAACTTCTCCATCACCTCATTAGCTCGAACGCCCAAATCACGAGATGAAGGAACAACCACCACCATTAAGCTTTCGAGCAAATCCAGAAGAAAAGCCTTCTATGAGTCCCCAGAAGGAGTCTTGTTGCGCAAGCTAAACGAGTGCTCAAAGGACGGAGATGTCATTCAAGCGCTTCGCCACTACGACGAGGCTCGAAAATTGGGGGTTCTACTCAGCCTTGATCACTACAACAAGTTGCTCTACCTGTGTTCTGTTGAAAGTGCTGCTGGTGTTCCCCATTTGGGTCTCAAAAGGGGGTTTGAGATTTTTCAGCAGATGTTGAATGACCGAGTTCAGCCCAATGAAGCCACTTTTACCAATGCTGCTAGGCTTGCTGCTGCCAAGGAAGATCCTGACATGGCTTTCGAATTGCTGAAGCAGATGAAGAATGTCGCGATTGCTCCGAAGCTGAGATCGTATGAGCCAGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCCGAGAAGGCTTATCTAGTTGATGCTGACATGGTTGAGTCTGGGATTGTGGCGGAAGAGCCCGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAATGCCAATAAGGAAGACAAGGTGTATGAGGTTTTGCATCGGTTGCGTGCTACGTTGAGGCAGGTGTCTGAATCAACTTTGGGGATAGTTGAGAACTGGTTTAACTCAGAGTATGCTGCGAAAATTGGGAAGGAGAAGTGGGATGTTAAGAAGGTGAGGGAAGGGATTGCGCGGGGAGGTGGAGGATGGCATGGACAAGGGTGGCTTGGGAGTGGGCGGTGGAAGGTGGTGAATACTCAGGTGAACGAGGATGGCGTGTGTCTCTCGTGTGGGGAGAAGCTTGCGAGCATTGATATTGATCCAAAAGAGACTGAAAATTTTGCTGCCTCATTGTCTAAATTAGCTTGTCAAAAAGAAGCTAAGGCAAACTTTGTTCATTTTCAGACATGGCTTGAGCGGCATGGTCCGTTTGATGCTGTTGTAGATGGTGCCAATGTAGGCCTTGCCAATGGGCATAATTTCAGCTTTTCACAGCTTAACACTGTTGTTGAACAATTACGTCAAATAAGCCCTTCAAAGAGATTGCCTCTTATAATTTTGCATATAAGTCGGGTACATGGTGGTCCTGCTCAGAATCCAAAAAACAAGAGACTTATAGAAAATTGGAAAAAAAATGGCGTTCTTTATGCTACACCTCAAGGTTCAAATGATGACTGGTATTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGCTAACAAATGACGAGATGAGGGACCACTTGTTCCAACTATTGGGTTCTAATTTTTTCCCGAGATGGAAGGAAAAACATCAGGTTCGAACATCAGCCTCAACTTGTGGACGCTCCCTAATTATGCCTCCCCGTTATTCAATAGTTATTCAGGAATCAGCCAGTGGTTGTTGGCATGTGCCAACTGTAACTACTGATGATCATGAGATCCCAAGGAAATGGTTGTGTGCCACAAGATCCAGAAAAGATTCATTACATAATCTATGA 1653 0.4586 MMARLAPPFSIFTQSHYWRPLLSSHNAKHALTAATNFSITSLARTPKSRDEGTTTTIKLSSKSRRKAFYESPEGVLLRKLNECSKDGDVIQALRHYDEARKLGVLLSLDHYNKLLYLCSVESAAGVPHLGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEVSVNANKEDKVYEVLHRLRATLRQVSESTLGIVENWFNSEYAAKIGKEKWDVKKVREGIARGGGGWHGQGWLGSGRWKVVNTQVNEDGVCLSCGEKLASIDIDPKETENFAASLSKLACQKEAKANFVHFQTWLERHGPFDAVVDGANVGLANGHNFSFSQLNTVVEQLRQISPSKRLPLIILHISRVHGGPAQNPKNKRLIENWKKNGVLYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQVRTSASTCGRSLIMPPRYSIVIQESASGCWHVPTVTTDDHEIPRKWLCATRSRKDSLHNL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02301 550 Gene3D Tetratricopeptide repeat domain 72 541 IPR011990 GO:0005515
Gma17g02301 550 Pfam Pentacotripeptide-repeat region of PRORP 64 271 IPR033443 -
Gma17g02301 550 PANTHER UNCHARACTERIZED 33 545 - -
Gma17g02301 550 CDD PIN_PRORP-Zc3h12a-like 370 492 - -
Gma17g02301 550 Pfam Protein-only RNase P 312 538 IPR031595 -
Gma17g02301 550 Gene3D - 330 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02301 Gma-Chr17 40967573 40972849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02301 131 265 Glycosyltransferase AT1G05670 24.444 2.64e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02301 17 40967573 40972849 Gma14g00738 14 7488537 7493222 GST