Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02297 ATGGTGGAAGCTGGTGAGGATTGTTGCGTGAAGGTCGCGGTCCACGTGCGACCTCTCATCGGCGAGGAGAAGGTTCAGGGATGCAAGGATTGCGTGACTGTCGTGTCAGGGAAGCCTCAGGTACAAATTGGTGCACATTCATTTACATTTGATCATGTTTATGGGAGCACTGGTTCTCCCTCATCTGCAATGTTCGATGAATGTGTTGTGTCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGCACTGGCTTTAAAGATGGTTGCCAAGAGGGAATAATACCTCTAGTTATGAGTTCCCTGTTTAACAAAATTGACACCTTAAAGCATCAGATTGAATTTCAGCTGCATGTTTCCTTTATTGAGATTCTAAAAGAAGAAGTAAGAGACTTGTTGGACCCATCCTCTATGAACAAACCAGAAACTGCAAATGGACATGCAGGGAAAGTGACTATTCCTGGGAAACCACCAATACAAATCCGTGAGTCATCAAATGGTGTCATTACTCTAGCAGGATGTACTGAAGTCAGTGTTACAACCCTAAAAGAAATGGCTGCTTGCCTAGAACAAGGATCATTAAGTAGAGCAACTGGGAGTACAAATATGAACAACCAATCCAGTCGTTCACATGCTATCTTCACCATCACATTAGAACAAATGCGAAAGCTCAATAGTCCTGGTGAGATCAGTTTAAATGATACAATGAATGAAGAATATCTTTGTGCCAAGTTGCACTTGGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACCGGGTCTGATGGTCTGCGATTTAAGGAAGGAGTCCACATTAACAAAGGCCTTCTAGCGCTTGGTAATGTTATTAGTGCGCTTGGTGATGAAAAGAAGAGAAAAGAAGGTGTTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTATGCAAACCGTGCACGCAACATCCAAAATAAGCCTGTTGTCAATAGAGATCCCATGTCCAACGAGATGCTAAAAATGCGACAACAACTTGAGTATCTGCAAGCAGAACTTTTTGCTCGTTCTGGTGGCTCTCCTGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCAGTTAATGAGGATCTTCGATGTGAACTTCATGAATACCGTAGTAGATGCTCTACTGTAGAACAATGTGAAAAGGATGTTTATGAAAATAGCTCATGTAATGTAAAGACTGATGGGCTCAAGAGGGGCTTACCTATCACAACATCTGATTATCCAATGAGTGAAACAACAGCAGGGGATTCAAGGGAAATTGAAGAAGTAGAAAAAGAGTGGGAGCATACTCTTCTGCAAAATAGTATGGACAGAGAGTTACATGAATTGAATAAACGCTTGGAGCAAAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAGGCACTCAAGCAGCATTTTGGAAGGAAGATAATGGAACTGGAGGATGAGAAAAGAACTGTGCAGCGAGATAGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAATACAGAAATCAGAGGATATCCATGCCCAAAAATTGAAAACACTTGAAGCCCAGATTCTGGATCTAAAGAAGAAACAGGAGAGTCAGGTCCAGCTCATGAAGCAAAAGCAAAAAAGTGATGAAGCAGCGAAACGATTGCAAGATGAAATACAATCTATAAAAGCACAAAAGGTTCAACTGCAACATAGGATAAAACAAGAGGCTGAGCAGTTTCGGCAATGGAAGGCTTCTAGAGAGAAAGAGCTGCTGCAATTAAAGAAGGAAGGAAGGAGAAATGAGTTTGAACGGCATAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAAAGAAAGACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAGCCGAGACACTTCAGGTATGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTGGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAGTTGGCCATGCTAAAGCAAGTAAACGGGTTTGCTGCCAAGGGTCTCACACCTCCAAGAGGAAAGAATGGATTTGCTAGAGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAGCATGCTGAACATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGGGCCTTCACTAATCGTGGACGTTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATTTATTCAATTCTGTTGGAGATGCTAGGTGCCAACTGTGGGAAAAGGACACCGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGTCTACTACGGCAAAGTGAAATGAAGAGAAAGGAAGCTGAGAAGGAACTAAAAGTGAGAGAGCAAGATGTTGCAACCACATTGGCTACACCAACTTCTGGAAACTCACCAAATTCATTGAAACACTATGCGGAAGACATCAAGGAACCTTTATCTCCAGAGTCCCTGCCGGTACAGAAACAACGCAAATATATGCCAGGCATCACTAATAGCCAAGTGAGGGAATCAGCAGCATTTATAGATCAGAGTAGAAGGATGATACCCATTGGGCAACTGTCAATGAAAAAACTTGCAGTTGTAGGACAAGCTTCTGGCAAGCTATGGAGGTGGAAAAGAAGCCACCATCAGTGGCTAGTACAATTTAAATGGAAGTGGCAGAAGCCATGGAGACTTTCTGAATGGATTCGGCACAGTGATGAGACAATCATGAGAGCAAGGCCACGTTCGCAGGCTTTGCCGCGAATAATAAATAAGGCAATAAAGAACCAAAAACTAGGTGCAGTTGCAGGGTGTAAAATTAATGGTTTCTGA 3126 0.428 MVEAGEDCCVKVAVHVRPLIGEEKVQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSAMFDECVVSLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQEGIIPLVMSSLFNKIDTLKHQIEFQLHVSFIEILKEEVRDLLDPSSMNKPETANGHAGKVTIPGKPPIQIRESSNGVITLAGCTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNSPGEISLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMLKMRQQLEYLQAELFARSGGSPEEVQVLKERIAWLEAVNEDLRCELHEYRSRCSTVEQCEKDVYENSSCNVKTDGLKRGLPITTSDYPMSETTAGDSREIEEVEKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGISDAEALKQHFGRKIMELEDEKRTVQRDRDRLLAEVENLAANSDGQIQKSEDIHAQKLKTLEAQILDLKKKQESQVQLMKQKQKSDEAAKRLQDEIQSIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLKKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSSRDTSGMSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNGFAAKGLTPPRGKNGFARASSMSPNARMARIASLESMLNISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYLFNSVGDARCQLWEKDTEIREMKDQIKELVGLLRQSEMKRKEAEKELKVREQDVATTLATPTSGNSPNSLKHYAEDIKEPLSPESLPVQKQRKYMPGITNSQVRESAAFIDQSRRMIPIGQLSMKKLAVVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETIMRARPRSQALPRIINKAIKNQKLGAVAGCKINGF 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02297 1041 Pfam Kinesin motor domain 18 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02297 1041 SMART kinesin_4 7 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02297 1041 Coils Coil 568 588 - -
Gma17g02297 1041 ProSiteProfiles Kinesin motor domain profile. 9 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02297 1041 Coils Coil 673 693 - -
Gma17g02297 1041 Coils Coil 492 512 - -
Gma17g02297 1041 Coils Coil 518 559 - -
Gma17g02297 1041 ProSitePatterns Kinesin motor domain signature. 259 270 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma17g02297 1041 CDD KISc_KIF4 8 365 - -
Gma17g02297 1041 PRINTS Kinesin heavy chain signature 260 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02297 1041 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02297 1041 PRINTS Kinesin heavy chain signature 314 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02297 1041 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g02297 1041 Coils Coil 592 633 - -
Gma17g02297 1041 Coils Coil 854 888 - -
Gma17g02297 1041 Coils Coil 404 431 - -
Gma17g02297 1041 Gene3D Kinesin motor domain 2 392 IPR036961 -
Gma17g02297 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 395 IPR027417 -
Gma17g02297 1041 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1020 - -
Gma17g02297 1041 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 1 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02297 Gma-Chr17 40915176 40930271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02297 10 390 Miscellaneous Gene Families AT5G06670 37.215 2.45e-55 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02297 17 40915176 40930271 Gma17g02297 17 40915176 40930271 ECH
Gma17g02297 17 40915176 40930271 Gma14g00742 14 7542292 7554036 GST
Gma17g02297 17 40915176 40930271 Gma04g00389 04 3354539 3366910 PCT
Gma17g02297 17 40915176 40930271 Gma06g00380 06 3269105 3280630 PCT
Gma04g00389 04 3354539 3366910 Gma17g02297 17 40915176 40930271 PCT
Gma06g00380 06 3269105 3280630 Gma17g02297 17 40915176 40930271 PCT