Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02295 ATGAGTAGCAACATGCCTGCAAAATTGTTGCTCACAACTTTGTACATCCTCTTGGTGTTTCTTCCTATCCACATGTCACCACATGATGTTAACATAGACACACACAGTTTCAAAAGTAGTAGTAGTACTAGTGGCCACAGGAGCAAAATTGGTGGTGGTGGCTCAGCCAAAGGTTGCAACAACAACAACAGCAACAGCAACCAATTGGACACAAACACAACACCATGTCAAAAATCAACAACCATTCAAGCAGTTCCTGCAGCTTCTTCACCTCCCCTTGTATTTGCAGACCAAAGACTTGAAGTAGTGTATCCAACAGTCCAAAAATTCAAGTCCACCATCACCTCAGATCCACTAGGAGTGACCAAAACTTGGGTAGGATCAGATATATGCAGCTACAAAGGCTTCTACTGTGACACCCCACCTGACAATAGTTCTGCCACTGCTTTGGCCTCTATTGACTTAAATGGTTTCCAACTATCTGCTTCCACCCTTGATGGCTTCATTGATAATCTTCCAGATATTGCTCTTTTCCATGCAAATTCCAACAATTTTGGTGGCACAATCTCACCCCAAATAGCCAAACTCTCTTACCTCTACGAGCTTGATGTCAGCAACAACCAATTATCAGGTCCATTTCCCACTGCTGTTCTAGGCATGAGCACTTTAACATTCTTGGACTTAAGGTTCAATTTCTTCTCTGGGGCAGTTCCACCACAAATTTTCACACAAAACCTCCAAGTTCTTTTCATAAACAACAACATTTTAACTCAAGGGTTGCCTGATAACTTAGCCTCCACTCATATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATTCCAAGAAGTCTTCCTAAGGCTTTGTCCACTCTAAGTGAAGTGCTTTTACTAAACAACCAGTTAACTGGTTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCAACAGTGTTTGATGCTGGCAACAATCAGTTAACTGGTCCTTTGCCTTTATCTTTGAGTTGTCTTGAGAAGGTGGAAGTGCTCAATTTTGGTGGTAATCTATTGTACGGCATGGTGCCTGAAGTGGTGTGTGTAGGATTAGTGAATTTGGTCAACTTTTCACTATCAGATAACTATTTCACACATGTGGGACCATTTTGTAGGATGCTGATTCAGAGAGGGGTTCTTGATGTGAGGAACAATTGTATTCCTGATCTTCCTTTCCAGAGATCAGTGATGGAGTGTGCTGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTCATGGTCTCATCCCTTGTAAGCTTCCTTTTCAACATTCCATTCACAATTAG 1332 0.4189 MSSNMPAKLLLTTLYILLVFLPIHMSPHDVNIDTHSFKSSSSTSGHRSKIGGGGSAKGCNNNNSNSNQLDTNTTPCQKSTTIQAVPAASSPPLVFADQRLEVVYPTVQKFKSTITSDPLGVTKTWVGSDICSYKGFYCDTPPDNSSATALASIDLNGFQLSASTLDGFIDNLPDIALFHANSNNFGGTISPQIAKLSYLYELDVSNNQLSGPFPTAVLGMSTLTFLDLRFNFFSGAVPPQIFTQNLQVLFINNNILTQGLPDNLASTHILLLTLANNKFMGPIPRSLPKALSTLSEVLLLNNQLTGCLPYEIGFLEEATVFDAGNNQLTGPLPLSLSCLEKVEVLNFGGNLLYGMVPEVVCVGLVNLVNFSLSDNYFTHVGPFCRMLIQRGVLDVRNNCIPDLPFQRSVMECAEFFATPRMCPFMWFHGLIPCKLPFQHSIHN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02295 443 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 441 - -
Gma17g02295 443 SUPERFAMILY L domain-like 113 400 - -
Gma17g02295 443 MobiDBLite consensus disorder prediction 36 72 - -
Gma17g02295 443 Gene3D Ribonuclease Inhibitor 269 412 IPR032675 -
Gma17g02295 443 Gene3D Ribonuclease Inhibitor 106 268 IPR032675 -
Gma17g02295 443 PANTHER BNAA09G53810D PROTEIN 9 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02295 Gma-Chr17 40905858 40907323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02295 91 419 Leucine-rich Repeat extension Gene Families AT3G24480 43.161 2.23e-84 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02295 17 40905858 40907323 Gma17g02295 17 40905858 40907323 ECH
Gma17g02295 17 40905858 40907323 Gma14g00744 14 7562261 7563568 GST