Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02290 ATGGAATATCTAGGGATTGATCTAAGCTGCGCCGTTGGATCTCTCCGCCACGGCCAGTTCCCGGAGAAGGATTGCTTGCTCCCTCTCATTTCCAAACTCCTCGGCTACGCCATCGTCGCCGCTTCCACCACCGTCAAACTTCCCCAGATTATGAAAATTCTGAAGCATCAGAGTGTGAGAGGCCTTAGCATGATATCCTTCGAGCTTGAAGTTATTGGATATACCATTGCCTTGGCTTACTGTCTCCACAAAGGCCTTCCATTTTCGGCTTACGGAGAGTTGTTGTTTCTTTTGATCCAAGCTTTAGTATTGGTTGCCATAATCTACTACTATTCTCGACCTTTGCATGCAATAACATGGATCCGGGCATTGCTATATTGTGCTGTAGCACCCACTATCTTAGCTGGTCAAATTGATCCTCTACTCTTTGAAGCTCTGTATGCATCACAGCATGCAATCTTTCTCTTTGCAAGGATCCCACAAATATGGCAAAACTTTTCTAACAAAAGTACAGGTGAACTCAGCTTCATAACTTCTTTTATGAATTTTGGAGGTTCAATGGTTAGAGTATTCACCACCATCCAAGAAAGTGCACCAAAAAGTGTTCTATTGGGCTATGCAATTGGTGTCGCAACAAATTTTACCATCTTGAGTCAGATTATAGCATACCAAAAGCCTCAGGTTGGAAAGGAGAAGAAAACAAAGTAA 708 0.4308 MEYLGIDLSCAVGSLRHGQFPEKDCLLPLISKLLGYAIVAASTTVKLPQIMKILKHQSVRGLSMISFELEVIGYTIALAYCLHKGLPFSAYGELLFLLIQALVLVAIIYYYSRPLHAITWIRALLYCAVAPTILAGQIDPLLFEALYASQHAIFLFARIPQIWQNFSNKSTGELSFITSFMNFGGSMVRVFTTIQESAPKSVLLGYAIGVATNFTILSQIIAYQKPQVGKEKKTK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02290 235 Gene3D - 29 112 - -
Gma17g02290 235 Gene3D - 139 225 - -
Gma17g02290 235 PIRSF Mpdu1 7 235 IPR016817 -
Gma17g02290 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 226 - -
Gma17g02290 235 SMART ctns 156 187 IPR006603 -
Gma17g02290 235 SMART ctns 44 75 IPR006603 -
Gma17g02290 235 Pfam PQ loop repeat 151 201 IPR006603 -
Gma17g02290 235 Pfam PQ loop repeat 30 89 IPR006603 -
Gma17g02290 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 226 IPR016817 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02290 Gma-Chr17 40848595 40853456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02290 1 224 Miscellaneous Gene Families AT4G07390 76.786 3.58e-132 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02290 17 40848595 40853456 Gma17g02290 17 40848595 40853456 ECH
Gma17g02290 17 40848595 40853456 Gma14g00749 14 7646055 7650930 GST