Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02289 ATGGGACAATCTGTTTCCTCCGCCGCCGTCGCTAGCCGTCGCGAGAGGGACCAAGGCCACCGCTCCGTCAACTCTTCCAAGACCAGATTCACCGCCTCGGTTTCGCCGATGGCCGGTTATTCCTCCGGCGCCGCCGAAGAAGGCGAAAACCATCGCGTGGAGGCCGTTGCCGATGAATCCACCGACTACATCTCCGATCTCCCGAACGAGTGCCTGGCTTCGGTGTTTCAGTTTCTCAGCTCCGCCGATCGGAGCCGCTGTTCGCTCGTTTGCCGGCGGTGGCTCCAGATCGAAGGACAGAGCCGCCACAGGCTTTCTCTGAACGCCGAACTGGATCTGTTTCCGGCGATTCCGTCGCTGTTCTCTCGGTTCGATTCGGTGACGAAGCTCGCGCTGAAGTGCGACCGCAGATCCGTGAGCATACGCGACGACGCGCTCGTGCTGATCTCGCAGCGGTGCCCTAACCTCACGCGCCTGAAGCTTCGCGCGTGTCGCGAGCTCACCGACGCAGGAATGGAAGCGTTCGCGAAGAACTGCAAGGGATTGAAGAAGCTCTCGTGTGGATCGTGCACGTTTGGATCCAAAGGCATGAACGCGGTGCTCGACAACTGCGCCGCGCTGGAGGAGCTCTCCGTGAAGCGCCTCCGTGGAATCGCTGACACTGCAGCGGCGGAGCCGATCGGTCCCGGCGTGGCTGCGGCGTCGCTCAAAACTGTTTGCCTGAAGGAGCTATACAACGGACAGTGTTTCGGAACGCTGATTCTCGGCGCGAAGAATCTGAAAACCTTGAAGCTTTTCCGGTGCTCCGGCGATTGGGACCGGCTCTTTCAATTATTGGTGGATCGAGTCACGAAAATTGTTGAGGTTCACCTCGAAAGGCTTCAGATTAGCGACGTTGGATTGCAAGCGATAGCGAATTATTCGAGTTTGGAGATTTTGCATCTTGTTAAGACACCTGAATGTTCTGATATTGGACTTGTTGCTATTGCAGACAGGTGCAAGCTTTTGAGGAAGCTTCATATTGATGGATGGAAGGCGAATCGAATTGGGGACGAAGGTTTGATAGCTGTTGCAAAAGGTTGCCCTAATTTGCTTGAATTAGTGCTAATTGGGGTTAACCCTACTAAGGCGAGTTTGGAAATGTTGGCGTCTAATTGCCAGAATCTCGAGCGGTTGGCTTTGTGTGGAAGTGATTCGGTTGGTGATCCTGAGATATCTTGCATTGCTGCAAAGTGTGTGGCTTTGAAGAAACTGTGTATTAAGAGTTGTCCCGTTTCCGATCAAGGGATGGAGGCATTGGGGAATGGGTGTCCGAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAAGGGGTTACCCCTGAGGGTGGTGATTGGTTGAGGAGGACTAGAGGGTCAGTTGCTGTTAATTTAGATACTGGTGAGGCAGAGCTTCAGGAAGCCAGTGCTAGTGATGGAGGGGCACAGGACAATGGTGTAGAGTTCCCTCAAATGCCTGCCCAAATCGCTgctgcatcgagcagcactcggtctagttcgtcgaggttagggcttttgcctacgaggatttcagcggctAGCACTTTTAGGAGATGGTCTGGTGGTAGCACTAGTGCACGCCATGGTTAG 1626 0.5166 MGQSVSSAAVASRRERDQGHRSVNSSKTRFTASVSPMAGYSSGAAEEGENHRVEAVADESTDYISDLPNECLASVFQFLSSADRSRCSLVCRRWLQIEGQSRHRLSLNAELDLFPAIPSLFSRFDSVTKLALKCDRRSVSIRDDALVLISQRCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGIADTAAAEPIGPGVAAASLKTVCLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLLVDRVTKIVEVHLERLQISDVGLQAIANYSSLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALGNGCPNLVKVKVKKCKGVTPEGGDWLRRTRGSVAVNLDTGEAELQEASASDGGAQDNGVEFPQMPAQIAAASSSTRSSSSRLGLLPTRISAASTFRRWSGGSTSARHG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02289 541 SUPERFAMILY F-box domain 58 97 IPR036047 GO:0005515
Gma17g02289 541 PANTHER UNCHARACTERIZED 46 473 - -
Gma17g02289 541 Pfam Leucine Rich repeat 153 176 IPR001611 GO:0005515
Gma17g02289 541 SMART LRR_CC_2 333 360 IPR006553 -
Gma17g02289 541 SMART LRR_CC_2 283 307 IPR006553 -
Gma17g02289 541 SMART LRR_CC_2 308 332 IPR006553 -
Gma17g02289 541 SMART LRR_CC_2 412 436 IPR006553 -
Gma17g02289 541 SMART LRR_CC_2 386 411 IPR006553 -
Gma17g02289 541 SMART LRR_CC_2 179 203 IPR006553 -
Gma17g02289 541 SMART LRR_CC_2 153 178 IPR006553 -
Gma17g02289 541 MobiDBLite consensus disorder prediction 24 38 - -
Gma17g02289 541 MobiDBLite consensus disorder prediction 1 51 - -
Gma17g02289 541 Gene3D - 63 97 - -
Gma17g02289 541 Pfam F-box-like 64 97 IPR001810 GO:0005515
Gma17g02289 541 SMART fbox_2 67 107 IPR001810 GO:0005515
Gma17g02289 541 ProSiteProfiles F-box domain profile. 61 97 IPR001810 GO:0005515
Gma17g02289 541 PANTHER F-BOX PROTEIN SKIP2 46 473 - -
Gma17g02289 541 SUPERFAMILY RNI-like 114 469 - -
Gma17g02289 541 Gene3D Ribonuclease Inhibitor 98 489 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02289 Gma-Chr17 40842614 40844305 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02289 17 40842614 40844305 Gma17g02289 17 40842614 40844305 ECH
Gma17g02289 17 40842614 40844305 Gma14g00750 14 7654467 7656573 GST