Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02287 ATGCCACTACACCATCACCTCTTCTTAGAAGAAACTAAAATGGCACATCGTTACCCAAAACCCCTTCTAGACACCCTCTACTGCTTAGAAGATCACATTCATTGGGAGGAAGAAGAACAAGTAGACTATAATGAGTACAGTAACACAACAACCACAAACACTAATTCCTCCAATGTGGTCTTGTTAGAACACGACCTCTTCTGGGACCACGAGGAGCTACCTTCTCTTCTCGCCAAAGAACACCAAAACCAACTCTCGAATACTCTTCTCCAAAACAACCTCGTTTTAGCCTCATCTCGAGAAGAAGCAGTGGAGTGGATTCTGAAAGTAAATGCTCGTTATTCCTTTTCTACCCTCACTGCGGTTCTCGCTGTTAACTACCTCGATAGGTTCCTCTTCAGCTTCAGATTCCAAaacgacaacaacgacaacaacaacaacaacAATCCTTGGCTCACACAACTATCCGCAGTGGCTTGCCTCTCTCTCGCTGCCAAATTTGAAGAGACCCACGTGCCCCTTTTTATAGACCTCCAAGTGGAGGAGAGTAAGTACTTGTTTGAAGCGAAAACCGTTAAGAGAATGGAAATCTTGGTTCTTTCCACACTTGGGTGGAAGATGAACCCTGTAACACCTCTTTCATTTCTTGATTACATCACAAGGAAACTGGGGTTAAAGGGCTATCTCTGTTGGGAGTTTCTCAGAAGGTGTGAAACCGTTCTTCTCTCTGTCTTTGCAGATTCTAGATTTATGGGTTATCTACCATCTGTGTTGGCTACTGCCACAGTGATGCGCGTGGTCAATACAGTGGAGCCTCGTCTAGGAGTGGAATACCAAGATCAGCTCTTGGGTATTCTTGGAATCGACAAGGAGAAGGTGGAAGAATGCTACAATCTGATGATGGAGGTTGTGTCAGGGTACGATGAGGAAGGAAAACGAACCAAGTTGAAGAAACGCAAGTTAGAGTCGATTATTCCTTGTAGTAGCCAAAACGGCGTAATGGAAGGGTCGTTTAGCTGTGATAGTAGTTCGAATGAGTCTTGGGAGTTAGGTGCATCTTCTGTTTCATCCTCCAGCAAGAAGACTAGAACTCAAGATCAGCTTCTATTGAACCATTCAAACTCATCAGATTTTATAAGCATTCCTCGCTAG 1152 0.4306 MPLHHHLFLEETKMAHRYPKPLLDTLYCLEDHIHWEEEEQVDYNEYSNTTTTNTNSSNVVLLEHDLFWDHEELPSLLAKEHQNQLSNTLLQNNLVLASSREEAVEWILKVNARYSFSTLTAVLAVNYLDRFLFSFRFQNDNNDNNNNNNPWLTQLSAVACLSLAAKFEETHVPLFIDLQVEESKYLFEAKTVKRMEILVLSTLGWKMNPVTPLSFLDYITRKLGLKGYLCWEFLRRCETVLLSVFADSRFMGYLPSVLATATVMRVVNTVEPRLGVEYQDQLLGILGIDKEKVEECYNLMMEVVSGYDEEGKRTKLKKRKLESIIPCSSQNGVMEGSFSCDSSSNESWELGASSVSSSSKKTRTQDQLLLNHSNSSDFISIPR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02287 383 ProSitePatterns Cyclins signature. 100 131 IPR006671 -
Gma17g02287 383 PANTHER CYCLIN D3.1 PROTEIN 46 361 - -
Gma17g02287 383 SMART Cyclin_C_2 210 342 IPR004367 -
Gma17g02287 383 Gene3D - 75 298 - -
Gma17g02287 383 CDD CYCLIN 99 200 IPR013763 -
Gma17g02287 383 SUPERFAMILY Cyclin-like 67 208 IPR036915 -
Gma17g02287 383 SUPERFAMILY Cyclin-like 211 310 IPR036915 -
Gma17g02287 383 PANTHER CYCLINS 46 361 IPR039361 -
Gma17g02287 383 Gene3D - 86 208 - -
Gma17g02287 383 MobiDBLite consensus disorder prediction 341 368 - -
Gma17g02287 383 Pfam Cyclin, N-terminal domain 78 208 IPR006671 -
Gma17g02287 383 Pfam Cyclin, C-terminal domain 210 311 IPR004367 -
Gma17g02287 383 SMART cyclin_7 105 201 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02287 Gma-Chr17 40803947 40806018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02287 22 320 Core Cell Cycle Gene Families AT4G34160 49.338 2.45e-93 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02287 17 40803947 40806018 Gma17g02287 17 40803947 40806018 ECH
Gma17g02287 17 40803947 40806018 Gma14g00752 14 7699475 7701770 GST
Gma17g02287 17 40803947 40806018 Gma04g00396 04 3411468 3413268 PCT
Gma17g02287 17 40803947 40806018 Gma06g00385 06 3320825 3322570 PCT
Gma04g00396 04 3411468 3413268 Gma17g02287 17 40803947 40806018 PCT
Gma06g00385 06 3320825 3322570 Gma17g02287 17 40803947 40806018 PCT