Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02275 ATGGCAACTTCTGAGAACAACAGCAGCGCGCGTCCCCAACGCGAAGCGAAGAAGAGGGCCGCAGCTGCAATATCCCAAATTCATGGCAACGCCGCCAAGAAGAAACGCGTCGTTTTAGGCGACGTCACTAACGTTTCCTCAAGCGACGTCGCCGTTTCCGTTTCCAAAAAACCCGTTCAGACACATAAAAATGTTAAACTCGAGAAACCGGCCGCGCCGGTTGCCACGCCGGAGAAGGTTGAGGAAAGACACGACCCGCAACTCTGTGGGCCCTACGTTTCTGATATATACGAATACCTTCGCGGAATGGAGGTGGATCCTAGTAAGAGACCATTGATGGATTATGTTCAGAAGATTCAGAGGGATGTTAATGCTAACATGCGCGGTGTTCTTGTGGATTGGTTGGTGGAAGTTGCAGAAGAATACAAACTTGTTTCGGACACGCTTTATTTCTCTGTTGCTTATATTGATAGGTTTTTGTCGTTGAATATTTTGTCGAGACAGAGGTTGCAATTGCTGGGGGTTGCTTCAATGCTCATTGCTTCGAAATACGAAGAGATTAAGCCGCCCGAGGTGGAGGATTTTTGTTACATTACGGATAACACATACTCTAAGGAAGAGGTTGTGAACATGGAGGCTGAAATATTGAAGGCTTTGAAATTTGAATTGGGTGGTCCTACAGTGAAGACATTCTTGAGGAGATTCTCCAGAGTTGGTCAAGAGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCCGAGCTCAGTTTGTTGGATTATAATTGTATAAAGTTTTTGCCATCTTTGGTGGCTGCATCAGTTGTATTCCTAGCAAGATTTATGTTTAGCACAAAGACACATCCTTGGAATTCGGCACTCCATCAACTCACTAGATATAAACCTGCTGACTTGAAGGAATGTGTTCTAAACTTACATGACTTGTACCTCAGTAGGAGAGGGGCCTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCCGAGATACCTCTTTCTTTTTTTGAATTTGAGGGGCAGATTCTTAGGCAATTGTAA 1104 0.4475 MATSENNSSARPQREAKKRAAAAISQIHGNAAKKKRVVLGDVTNVSSSDVAVSVSKKPVQTHKNVKLEKPAAPVATPEKVEERHDPQLCGPYVSDIYEYLRGMEVDPSKRPLMDYVQKIQRDVNANMRGVLVDWLVEVAEEYKLVSDTLYFSVAYIDRFLSLNILSRQRLQLLGVASMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEAEILKALKFELGGPTVKTFLRRFSRVGQEGVDTSDLQFEFLSCYLAELSLLDYNCIKFLPSLVAASVVFLARFMFSTKTHPWNSALHQLTRYKPADLKECVLNLHDLYLSRRGASLQAVREKYKQHKFKCVATTPSPPEIPLSFFEFEGQILRQL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02275 367 CDD CYCLIN 127 216 IPR013763 -
Gma17g02275 367 PANTHER CYCLINS 23 364 IPR039361 -
Gma17g02275 367 Pfam Cyclin, N-terminal domain 95 223 IPR006671 -
Gma17g02275 367 Gene3D - 95 345 - -
Gma17g02275 367 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 23 364 - -
Gma17g02275 367 CDD CYCLIN 226 317 IPR013763 -
Gma17g02275 367 Pfam Cyclin, C-terminal domain 226 348 IPR004367 -
Gma17g02275 367 MobiDBLite consensus disorder prediction 1 23 - -
Gma17g02275 367 PIRSF Cyclin_A_B_D_E 1 354 IPR039361 -
Gma17g02275 367 ProSitePatterns Cyclins signature. 128 159 IPR006671 -
Gma17g02275 367 SUPERFAMILY Cyclin-like 84 223 IPR036915 -
Gma17g02275 367 SMART cyclin_7 133 217 IPR013763 -
Gma17g02275 367 SMART cyclin_7 230 318 IPR013763 -
Gma17g02275 367 SMART Cyclin_C_2 226 349 IPR004367 -
Gma17g02275 367 SUPERFAMILY Cyclin-like 226 351 IPR036915 -
Gma17g02275 367 Gene3D - 109 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02275 Gma-Chr17 40669198 40672868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02275 4 358 Core Cell Cycle Gene Families AT1G47210 57.337 2.86e-152 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02275 17 40669198 40672868 Gma17g02275 17 40669198 40672868 ECH