Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02270 ATGAAGAAAGCAGCGATTTTGAAGTCTCTCCAAACCATTATGGTTGTCTTCCTGCTGATAGTACTCTTTAGCAGCAACACCAAAGCAGAAAAAGAAACAATCCACGACCATGCAAACAAAAAGACCTACATAATCCACATGGACGAGACCACCATGCCCTTAACCTTCACCGACCACCTCAGCTGGTTCGACGCCTCCCTCAAATCAGCGTCCCCCTCCGCGGAGATTCTCTACACTTACAAACACGTGGCCCATGGCTTCTCCGCCAGACTCACTCCCAAGGACGTAGACACACTTGCAAAACAACCCGGCATCCTCTCCGTCATCCCCGAACTCAAATACAAACTCCACACCACAAGAACTCCCAACTTCCTTGGACTTGACAAAGCCACCACCTTGTTACCCGCCTCGGAGCAACAGAGCCAGGTGGTCATTGGACTCCTCGACACCGGCGTCTGGCCCGAGCTCAAAAGCCTCGACGACACGGGCCTCGGCCCGGTCCCTTCCACCTGGAAAGGCCAGTGCGAAATTGGAAACAACATGAACTCTTCCAACTGTAACAGAAAACTTGTCGGAGCGAGGTTTTTCTCCAAAGGCTACGAAGCCGCACTTGGACCCATTGACACAACTACAGAGTCAAAGTCAGCGCGTGACGATGACGGGCATGGGAGTCATACTTTAACCACCGCGGCAGGCTCGGTTGTACCCGAAGCTAGCCTCTTCGGCTTGGCGTCGGGTACGGCGCGTGGAATGGCCACGCAAGCGCGTGTGGCGGTTTACAAAGTGTGCTGGCTCGGCGGGTGTTTTACTTCCGACATAGCCGCGGGAATCGACAAGGCCATAGAAGACGGCGTGAATGTTCTGTCCATGTCCATTGGGGGAAGCTTGATGGAGTATTACAGGGATATAATAGCGATTGGATCCTTCACTGCCATGTCACACGGGATTCTGGTGTCCACGTCAGCGGGGAACGGTGGGCCCAGTCAGGGAAGTTTGTCCAACGTGGCACCGTGGATAACAACTGTGGGAGCGGGAACTATCGACCGCGATTTCCCTGCTTACATAACCCTCGGAACAGGGAAAACATACACCGGAGCTTCTCTTTATAGCGGTAAACCCTTGTCGGATTCGCCGCTTCCTCTTGTTTACGCTGGGAACGCGAGTAACTCTTCTGTAGGGTATCTATGTTTGCAAGATTCTCTGATTCCTGAGAAAGTTTCAGGGAAAATTGTTATATGTGAGAGAGGTGGGAATCCGAGAGTGGAAAAGGGTTTGGTGGTTAAGCTTGCTGGAGGTGCTGGAATGATATTGGCGAATAGTGAAGCCTACGGAGAAGAGTTAGTTGCTGACTCTCATCTTCTTCCTGCTGCGTCTTTGGGACAAAAATCAAGCGAGATTTTGAAGAACTATGTTTCATCTTCACCTAATCCAACAGCTAAGATTGCTTTCTTAGGGACCCATTTGCAGGTTCAACCTTCTCCTGTTGTAGCGGCTTTTAGCTCCAGAGGACCAAATGCACTCACCCCAAAGATTCTCAAACCGGATCTAATAGCACCAGGAGTCAACATTTTAGCCGGTTGGACCGGTGCGGTTGGACCAACTGGGTTGACTGTTGACACCCGCCATGTCAGCTTCAACATAATTTCTGGAACATCCATGTCATGCCCTCATGTAAGTGGCTTAGCCGCAATTCTCAAAGGAGCACACCCTCAGTGGAGCCCTGCCGCCATCAGGTCCGCACTCATGACAACAGCGTACACGAGTTATAAAAACGGTGAAACGATTCAAGATATTTCAACAGGACAACCTGGGACGCCGTTTGATTACGGTGCCGGACACGTCGATCCCGTGGCCGCTCTTGATCCTGGTCTCGTCTACGATGCCAACGTGGACGATTACTTAGGGTTTTTCTGCGCACTAAACTACTCGTCATTTCAAATCAAGCTTGCTGCGAGGAGGGACTATACGTGTGACCCGAAGAAGGATTACAGAGTGGAGGATTTTAATTATCCTTCTTTTGCGGTTCCTATGGATACAGCTTCGGGGATTGGGGGAGGTTCCGATACTCTGAAGACCGTGAAGTACTCTAGGGTTTTGACTAACGTGGGAGCTCCGGGAACGTACAAAGCTTCGGTGATGTCGTTGGGGGATTCGAATGTGAAGACTGTGGTGGAACCGAATACGTTGAGTTTCACGGAATTGTACGAGAAGAAGGACTATACGGTGTCGTTTACATACACTTCGATGCCGTCTGGGACGACCAGCTTCGCACGTTTGGAATGGACGGATGGGAAGCATAAGGTTGGTAGTCCAATTGCGTTCAGCTGGACATGA 2334 0.5086 MKKAAILKSLQTIMVVFLLIVLFSSNTKAEKETIHDHANKKTYIIHMDETTMPLTFTDHLSWFDASLKSASPSAEILYTYKHVAHGFSARLTPKDVDTLAKQPGILSVIPELKYKLHTTRTPNFLGLDKATTLLPASEQQSQVVIGLLDTGVWPELKSLDDTGLGPVPSTWKGQCEIGNNMNSSNCNRKLVGARFFSKGYEAALGPIDTTTESKSARDDDGHGSHTLTTAAGSVVPEASLFGLASGTARGMATQARVAVYKVCWLGGCFTSDIAAGIDKAIEDGVNVLSMSIGGSLMEYYRDIIAIGSFTAMSHGILVSTSAGNGGPSQGSLSNVAPWITTVGAGTIDRDFPAYITLGTGKTYTGASLYSGKPLSDSPLPLVYAGNASNSSVGYLCLQDSLIPEKVSGKIVICERGGNPRVEKGLVVKLAGGAGMILANSEAYGEELVADSHLLPAASLGQKSSEILKNYVSSSPNPTAKIAFLGTHLQVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWTGAVGPTGLTVDTRHVSFNIISGTSMSCPHVSGLAAILKGAHPQWSPAAIRSALMTTAYTSYKNGETIQDISTGQPGTPFDYGAGHVDPVAALDPGLVYDANVDDYLGFFCALNYSSFQIKLAARRDYTCDPKKDYRVEDFNYPSFAVPMDTASGIGGGSDTLKTVKYSRVLTNVGAPGTYKASVMSLGDSNVKTVVEPNTLSFTELYEKKDYTVSFTYTSMPSGTTSFARLEWTDGKHKVGSPIAFSWT 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02270 777 SUPERFAMILY PA domain 373 442 IPR046450 -
Gma17g02270 777 ProSiteProfiles Serine proteases, subtilase domain profile. 113 620 - -
Gma17g02270 777 Gene3D - 637 776 - -
Gma17g02270 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Gma17g02270 777 Gene3D - 348 489 - -
Gma17g02270 777 SUPERFAMILY Subtilisin-like 116 624 IPR036852 GO:0004252|GO:0006508
Gma17g02270 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Gma17g02270 777 Gene3D Peptidase S8/S53 domain 143 633 IPR036852 GO:0004252|GO:0006508
Gma17g02270 777 CDD PA_subtilisin_like 354 481 - -
Gma17g02270 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 775 IPR045051 -
Gma17g02270 777 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Gma17g02270 777 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Gma17g02270 777 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Gma17g02270 777 Pfam Fibronectin type-III domain 667 773 IPR041469 -
Gma17g02270 777 Pfam PA domain 380 465 IPR003137 -
Gma17g02270 777 Pfam Peptidase inhibitor I9 42 117 IPR010259 -
Gma17g02270 777 Pfam Subtilase family 141 612 IPR000209 GO:0006508|GO:0008236
Gma17g02270 777 CDD Peptidases_S8_3 114 586 IPR034197 -
Gma17g02270 777 MobiDBLite consensus disorder prediction 209 228 - -
Gma17g02270 777 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02270 Gma-Chr17 40602294 40604896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02270 38 777 Subtilisin-like Serine Gene Family AT5G67360 64.151 0.0 988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02270 17 40602294 40604896 Gma17g02270 17 40602294 40604896 ECH
Gma17g02270 17 40602294 40604896 Gma14g00765 14 7859745 7862547 GST
Gma17g02270 17 40602294 40604896 Gma04g00416 04 3607395 3610293 PCT
Gma17g02270 17 40602294 40604896 Gma06g00405 06 3477772 3480456 PCT
Gma04g00416 04 3607395 3610293 Gma17g02270 17 40602294 40604896 PCT
Gma06g00405 06 3477772 3480456 Gma17g02270 17 40602294 40604896 PCT