Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02262 ATGGCTTCAGCGGAGCAGCCTCTGAAGAAGCGAAAGCTCTACGAGCCTTTACCAGAACCGCCACCGTTTTCGCCGCCGCAACCGCCGCCGCCGGAATCCGAAGCAACCCCTTCCTCTCCGCAAACCCTACCCACGCCGTCGTCCACTCCCCCGCTGTCTCAGGAGGAGATTCTCGCGAAGCGGCGGAACAAGGATGAAATTCGAAGCGTGTACGAAGGTTACAAGCGGATTAAGCGTTGCTTGCTTCGAAAAGACGCTCCCTCCTCCATGTCTGAACTCGAACAGAGTTATCTCGCTCTCATCACTTCTTCCAGAGGTTGTATGAGTGTACAAAGAATTGTGGCGGATCTTATTCCTCGGTACGCATGTCACTGTCCAACTGCTTTGGAAGCTGCAGCTAAAGTTGTTATTAATATGCACAACTTGAGTTTGGCCTTGATCAGCAGAGGAGAGGATTCCAGTGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTGTGGCCTAGCTGATGTTTGCTGCGATGCTTCATCGGTGGCGCCTACATTAGCTGTAATTAGAGGAATTTGCGAAGCAGTTTTTCAGAATGTGCTCACCTTTTTTATAGCCTTATTCGAAGGGAAGGATGTCTTACAGATGGTTGACAAGAATTTCCTGAATATGCAAGATACTCCTGAGGCCTTTTCTGAGTTGAAACAAAAGATTTTAGATGAAGATGAATCTTCATTGACTAAACTGTCCAAGTTGCGCGTGTTATGTCTACTTCGGATATTCTTCTCTTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTTGGCTCTGCCACAAAAGAGGCAACTAATGCCGAAGGACAGCGTTTTCTGAGCCTGGTGACTAGCACATTTGATGATGATAAGGCAGTTCACCTTTTCGAAAGAGCAATTGGTGGATCTAAATCATGTACAGATTCTACTGGGTCAGGCATCAGAGACAATGAGGCTGGTGAGGCAATTATGACTGAAGACAACCATGTTTCTGGTGGTGATTCATCTGTTGGCAAAAGCTGCTTGCTTATGCAGGTCCTTGACAAGGATCCCTTACTGCGGAAATGGATGTTGTGTAGATGTAAGAAGTTGCTTGACTTGCTCTCTGATGTATCACTGGAAATTACGTCAGTACTGCAAGGAATTCTTGGAATGTTTCCTCGACAAACAGATTTGGAGGACTGTCAAGCAGATAGTGATGAAGATAAATCTGATTCTTCAATTTACATGAATAGGAACTACATGGTTCCTAGGATCTCTGAGGAACATGAAAGCATTGGTGAATCATCTGGAAAAGGCAGCAGTTTGAGAGTTCATGTTGGTTCTTCTGATGGTTTTACTGATAAATATGTGATGGATCATAGCTCAGCAGTTCCTCTTGACCATGTTCCTGTGTTAAAAGTGGGTTCACATTACGATAATGGAGTCTCAAAGCCCATGAGCATTGGGGTGGGGGAGGAAGGGAATATGCCCACACCTAGGGACTCGGTAAGCCATCAAATGTTCTCACCTGCTGTTAGAACACCAGTAGACTTTAGGAGCAATTCATTTGAAGGTAGAAATGATTTCCTGAATGTAGAGAAAAATCATGTCTTAAATATGAACTTCAATTCACCTCCGCTGAGATCCTCTAGTGGATCTGTTAGTAATTCTTTGGCATCTCCTAATCATCATTTTATGTCACCAACTGCTTCAACAAAAGGTCAAATTGTCTGGTGCTGTGATGGGGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAAGCAGTTATGGATAGGCTATGTAGGTCCTGATGTGCCTGAAAATCATATTAGGTTTCACTTAGAAAGATTTGGTACTATTGAACAATTTATTTTCTTCCCAGTAAAAGGATTTGCCTTGGTTGAGTACAGAAGGATCATTGACGCAATAAAAACTCGACACTGTTTACCTGGATGTTTTCCTTGCCGTGTAAAATTCATGGATATAGGACTTGGAACTAGGGGTGCAATGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATATTCCTAGTCAATGGGCCAGGGATGAGATCATGCATGAAACAAGGAAGGTGATCCACAAGGGTCCTCTTGCATTCATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAATTTGAAACTCCTGAAGAAGCTGCAACTGTCATGTTGCATTTGAGACAACTACGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGGAACAGTTAATGTTGGAATTGGGCATGCTTATATGGATGGTGGAAGGCCTATACCTGcccctccccctccccctccccctcccAATCTTGACCTTAAAGTTAACAACCCTGCTGGATCACCTCATGCTCGAACTCTATCAGGGAGCCCCGCCGATAGCAGTCGAACAAGGATGTCTCACTTGTCTACCTTACTTGCTTCATTGCGCACAAAGTATAATATTAATCAAAACCTAGGTCTCAGTGATAATTATACGATTGGAAATAATTGTCCTCCCATGCGTGAAGAAGATATGGTGCCATCCAGCACTCTGTGCATAACTATTCCACGTAGTAGCTCTTTGTTCCTCACAGATGATGAGTTAATGGCCATTTGCAATCTTGCCATTGGAAACTCTGGATCAATTGTGCAGTTGACACAAACAAACTTGCAGATGGGATGTAGTTGGTTTGTCGAATGTAGTAATGTTGATGGTGCAGTTTCTGTTCTAAAGAATCTCCGTGGTTGTCCAGGATTGTTCTTCCAGATAGAATTCAGCAAACCCGGAAATCAGATTGCTGTACCATTTTCAGTTAAACCAGAGAACAATTCAATGGAGCTTGTATCCCCCAGAATAAATTCAGAAAATCATAATCTGCCTCAGTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGCTTGGAGCAAGAAAACCTGATGGTTATGATAATTTGTCACAGGATCCTCATCAAGGAGGTATTGTTCCGCATTCACACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCTTCTCCTTTTGTTCGCCCTGTTTATGTTCCTCCTAATGGTCCATGGGATCGTCGGGGAATTAATAATCATTTACCTGTCAGCCAATTCAAGACAGGAGTAATGCCAAATAATTTTCATGGTAATGCTGTTGTCAGTCCTTTTATTCCTGCTTCAGTAACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCTTATAACCAGCAGGTGCCTCCATCAATTATACCACCACCTTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCACTTCCTCCTTCTCCACCACCTTTACCCCAGGTTCAGCCACCCTTGGTCCCTCCACTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCACCACTGCCTGTTCAAGAAGCAGTCGATATGGAATGTTCAGGGCAGTCCTTGCTGTATCAATGGCAGGGGAATCTCTGTAAAAGTGGGGTTAATTACTGTACAATTTATGCATGCAAAGCAGATTCAAATATTTGTCGATATTCAAATGCCATACCTGAGCCTGCCGAGTGGCCCTCAAAATTAGACATGACAAAACGAACAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGGTTTCAGGATTTCATATCATACTTGAAGCAGAGGGATTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGTTGCTATTCATTCTCCCCCACTCACTTGAAACGTGCTCTTTGCTTTCTATTGCACATGATCCATCAGATTGCCTCATTGCTTTGGTTCTTCCCAAAGAAACAAACTTTGAGTGGATATGA 3933 0.433 MASAEQPLKKRKLYEPLPEPPPFSPPQPPPPESEATPSSPQTLPTPSSTPPLSQEEILAKRRNKDEIRSVYEGYKRIKRCLLRKDAPSSMSELEQSYLALITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVINMHNLSLALISRGEDSSGIAFETARACICGLADVCCDASSVAPTLAVIRGICEAVFQNVLTFFIALFEGKDVLQMVDKNFLNMQDTPEAFSELKQKILDEDESSLTKLSKLRVLCLLRIFFSCPKDLLAACLDLFGSATKEATNAEGQRFLSLVTSTFDDDKAVHLFERAIGGSKSCTDSTGSGIRDNEAGEAIMTEDNHVSGGDSSVGKSCLLMQVLDKDPLLRKWMLCRCKKLLDLLSDVSLEITSVLQGILGMFPRQTDLEDCQADSDEDKSDSSIYMNRNYMVPRISEEHESIGESSGKGSSLRVHVGSSDGFTDKYVMDHSSAVPLDHVPVLKVGSHYDNGVSKPMSIGVGEEGNMPTPRDSVSHQMFSPAVRTPVDFRSNSFEGRNDFLNVEKNHVLNMNFNSPPLRSSSGSVSNSLASPNHHFMSPTASTKGQIVWCCDGDPAAMDIVSASKQLWIGYVGPDVPENHIRFHLERFGTIEQFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDIGLGTRGAMNGVAVGSSSHIYVGNIPSQWARDEIMHETRKVIHKGPLAFIDLSCEFALLMEFETPEEAATVMLHLRQLRRERSNYNQHFGPGTVNVGIGHAYMDGGRPIPAPPPPPPPPNLDLKVNNPAGSPHARTLSGSPADSSRTRMSHLSTLLASLRTKYNINQNLGLSDNYTIGNNCPPMREEDMVPSSTLCITIPRSSSLFLTDDELMAICNLAIGNSGSIVQLTQTNLQMGCSWFVECSNVDGAVSVLKNLRGCPGLFFQIEFSKPGNQIAVPFSVKPENNSMELVSPRINSENHNLPQSNWHFPGSREMSELGARKPDGYDNLSQDPHQGGIVPHSHSGAHGPSIPPPQQIQSSPFVRPVYVPPNGPWDRRGINNHLPVSQFKTGVMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIIPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPLPVQEAVDMECSGQSLLYQWQGNLCKSGVNYCTIYACKADSNICRYSNAIPEPAEWPSKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSSSDHKRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAHDPSDCLIALVLPKETNFEWI 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02262 1310 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1 1309 - -
Gma17g02262 1310 MobiDBLite consensus disorder prediction 794 811 - -
Gma17g02262 1310 MobiDBLite consensus disorder prediction 1092 1146 - -
Gma17g02262 1310 SUPERFAMILY RNA-binding domain, RBD 585 655 IPR035979 GO:0003676
Gma17g02262 1310 MobiDBLite consensus disorder prediction 770 786 - -
Gma17g02262 1310 PANTHER NUCLEIC ACID BINDING PROTEIN 1 1309 - -
Gma17g02262 1310 Gene3D - 587 668 IPR012677 -
Gma17g02262 1310 MobiDBLite consensus disorder prediction 17 47 - -
Gma17g02262 1310 MobiDBLite consensus disorder prediction 1083 1146 - -
Gma17g02262 1310 MobiDBLite consensus disorder prediction 1 53 - -
Gma17g02262 1310 Pfam SPOC domain 1159 1301 IPR012921 -
Gma17g02262 1310 MobiDBLite consensus disorder prediction 982 1024 - -
Gma17g02262 1310 MobiDBLite consensus disorder prediction 767 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02262 Gma-Chr17 40482558 40493182 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02262 17 40482558 40493182 Gma17g02262 17 40482558 40493182 ECH
Gma17g02262 17 40482558 40493182 Gma14g00775 14 7991594 8007842 GST