Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01145 ATGGACTGGGGTGGTGCTGGTGCTGGTCTTAACAATCACTACAGAACTACTTACAAAGACGACCAAAAATCCATGATGGAGGTGGCACTCATTTCAAACATGGATCCTGTAAATATTGGGCTGGGCTGTTCAGATAAGCCAGCTCCTGTTACTTCACTGAAGCCAAGAAAGAAAACAATGACATCAGTGTATTTGAAGTTCTTTGAGACAGCTGCTGATGGTAAGACTCGGAGATGCAAGTTTTGTGGACAGAGCTATTCCATTGCAACCGCCACAGGCAATTTGGGAAGGCATCTTGCTAATCGTCATCCAGGTTATGACAAGTCAGGGGAAGCTGTCAGCAATGCAGCAGCACGACCTGTCACTGTGGTTAAGAAGTCCCAGCCTCATGGAAAAGCAAACCAGGTGGATTATGATCATCTAAATTGGTTGCTCATTAGGTGGCTTGTTTTAGCTTCTCTCCCTCCTTCAACTCTGGAGGAGAAGTGGCTCGTGAATTCCTACAAGTTTCTAAATCCATCAATACAACTGTGGCCAAGTGACAAGTATAGAACTGTACTTGATGAAGTTTTCAGAAGCATGAGGGAAGATGTAAGAGCGTTGTTGGAGCAGGTTTCTTCCAAAGTATCCATTACACTTGATTTCTGGACCTCCTTTGAACAGATCTACTATATGAGTGTAACATGTCAGTGGATCGACGAAAACTGGTGCTTCCAGAAGTTGCTTCTTGATATCTGTCGCATACCCTATCCATGTGGGGGTGCAGAGATCTATCGTTCCCTCATAAAAGTTCTTAAATTTTACAATATTGAAAACAGAATCCTGTCCTGTACCCATGATAATAGTACAAGTGCCATGCATGCCTGCCATACTCTGAAAGAGGACTTGGATGGTCAGAAAATAGGGCCGTTCTGTTATATTCCCTGTGCTGCTCGAACTTTGAATGCGATAATAGATGATGGGTTGAGATCCGCAAAACAAGTCATTTCTAAGATACGGGAGTTTGCAATAGAGTTAAACGCCTCACCAGTGATCTCTGAGGATTTTATTCAATTATCCACAGCTTATCAAGAAGGTATTTGGAAATTTCCTCTTGATGTTTCAGCAAGGTGGAGTGGAAACTACCAAATGCTTGATCTTGTTCGCAAGGCAGGTAAATCAGTGGATGCTGTTATTCGTAAATACGAGGAAGTGTTAGGCAGTAGGATGCTGCTGGGATCTTCTGACAAAAGTGCAGTTAGCATCATGCATCAATATCTTGAACCATTTTACAAAACCACAAACAACATCTGCACAAGTAAGGTGCCAATGGTTGGGCTTGTCCTTTTCTTCGTGGATCACATTTCAGAAACAATTACTTCCTTCAGAGAATCACGGCTCAGCCCAGAATGGCTAAAAAATGCTGCAGAAGAAATGGCTAAAAAAGCCAGAAATTATATTAATCAAGTTTGCAACATATTTACTTATATGACAGCAATTCTTGATCCTCGAATAAAGGGAGACCTGATCCCTGATAGTTTAAACTCAGAAAACTTTCTGGATGAAGCAAGAACCCATTTTATAAGAAATTATTCAGCCAGCCATTTCTCATCCATGAGTTCTGGATACAATGCTCAAGAAATTGAAGATGGAGGAAGTGTTTCCTTTGCTGAGGAAATAGCACGCAAGAAGCGAAGGACAAGCATGAGCTCTGCCACTGATGAGCTTACGCAGTACCTATCAGAGGCTCCAGCTCCAATACCAACAGATGTCTTAGAGTGGTGGAAGGTCAACAGTACACGCTACCCTCGACTATCTGTGATGGCTAGAGATTTCCTGGCTGTGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAAGGGTGATGAAATTGACAAGCAAAGAATCTGTATGTCACATGATAGCACACAAGCTATTCTTTGTATCAAGTCATGGATTCAGGTTGGCATCAAGTTTAAGTTTAAATCAACTGAGATAGATTATGAGCGGTTGATGGAATTGGCAGCTGCAGCTGCTGCAACAGACAATAGTCCTTCAAGTTCTGACAAGAAGCAAAGATAG 2067 0.4233 MDWGGAGAGLNNHYRTTYKDDQKSMMEVALISNMDPVNIGLGCSDKPAPVTSLKPRKKTMTSVYLKFFETAADGKTRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGEAVSNAAARPVTVVKKSQPHGKANQVDYDHLNWLLIRWLVLASLPPSTLEEKWLVNSYKFLNPSIQLWPSDKYRTVLDEVFRSMREDVRALLEQVSSKVSITLDFWTSFEQIYYMSVTCQWIDENWCFQKLLLDICRIPYPCGGAEIYRSLIKVLKFYNIENRILSCTHDNSTSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNAIIDDGLRSAKQVISKIREFAIELNASPVISEDFIQLSTAYQEGIWKFPLDVSARWSGNYQMLDLVRKAGKSVDAVIRKYEEVLGSRMLLGSSDKSAVSIMHQYLEPFYKTTNNICTSKVPMVGLVLFFVDHISETITSFRESRLSPEWLKNAAEEMAKKARNYINQVCNIFTYMTAILDPRIKGDLIPDSLNSENFLDEARTHFIRNYSASHFSSMSSGYNAQEIEDGGSVSFAEEIARKKRRTSMSSATDELTQYLSEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRICMSHDSTQAILCIKSWIQVGIKFKFKSTEIDYERLMELAAAAAATDNSPSSSDKKQR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01145 688 SUPERFAMILY Ribonuclease H-like 195 650 IPR012337 -
Gma17g01145 688 Pfam Domain of unknown function (DUF4413) 431 510 IPR025525 GO:0003677
Gma17g01145 688 SMART bed5 59 106 - -
Gma17g01145 688 Pfam hAT family C-terminal dimerisation region 568 648 IPR008906 GO:0046983
Gma17g01145 688 Pfam BED zinc finger 66 104 IPR003656 GO:0003677
Gma17g01145 688 PANTHER BED FINGER-RELATED 39 658 IPR045259 -
Gma17g01145 688 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 39 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01145 Gma-Chr17 9969456 9973121 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01145 17 9969456 9973121 Gma17g01145 17 9969456 9973121 ECH
Gma17g01145 17 9969456 9973121 Gma05g00132 05 1342144 1345412 GST
Gma17g01145 17 9969456 9973121 Gma15g01996 15 33275572 33279444 PCT
Gma17g01145 17 9969456 9973121 Gma09g00941 09 17962392 17966578 PCT
Gma15g01996 15 33275572 33279444 Gma17g01145 17 9969456 9973121 PCT
Gma09g00941 09 17962392 17966578 Gma17g01145 17 9969456 9973121 PCT