Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00330 ATGGAGGAGAAGAGAGAGAAAGAGAAAAACTCAAAGTCATCATCATCTACCATGGCAAATTCTGTGGCATTTTCCGACGAGATTCCTAACATGAGCATGAGCTTCCCTTTCTCCCCTGCTTTCTCTAGTAGCATCTTTGACATGATGCCACCACCACCACCTTCCTCATCTCACGATCCTAAAGCTCCCAACTTTGCTAATAGCTTCATGGACTTGCTCGCTGTCCCTGCTGATTATTATACCCCTTCTTTATTCGACTGGTCCCAAAACACCGCCCCCACGTCAGCACCACCACCTTCCACCACCCAAATCAACCACCCTCTTCCGTCGCCAGCCAGCTCCAATGTCCCCGACGGCTCCGAGGTTCTCAACACTCCGGCGTCTCCCAATTCTTCGTCTATTTCATCATCGTCCAACGAAGCAGCAGCCGCCACCACCGCCAACAAAACAACGGGAAATGATAATGAAGAGGAGGAAGATGAAACAGCAATAGATGCAACAGCAGGCAGAGAAGAAGAAGATCATCAAGACCAAGACAAGACTAAGAAACAGCTCAAGCCAAAAAAGAAGAACCAAAAAAAGCAAAGAGAGCCGAGATTTGCGTTCATGACAAAGAGTGAAGTGGATCACCTCGACGATGGCTATAGATGGCGCAAGTACGGTCAAAAAGCCGTCAAAAACAGCCCTCATCCAAGGAGCTATTATCGTTGCACCACCGCGACATGCGGCGTGAAGAAGCGCGTGGAGCGTTCCTCGGAGGATCCTACGGTGGTGGTGACAACCTACGAGGGGCAACACACTCACCCGTGTCCTGCCACGTCACGGGCTAGCTTCGGGTTCATGCACTCCGAAGCAAGTGGGTTCGGACCCACCAGTGGACTAGGTTCGGCACACTTTATGCTGCAACAACAACAACAGTTTCGGGACCAAGCACAAGCACAAGCAGCAATGTTGTATAACTCCACCTCATCGTCATTGTCATTGCCACTGAATGTTGTTAACTCAGCTTCTTGTGTTAATAATAGCTATGCCAATACGTCATCGTTGAGTGGCTTTCTTCAGGGCCAAGAGAATCATCAGCGAGGTTTTGTGCCGTCTAGGGTGGTGGCTCCTCATATTTTCTTGAGGGACAATGGGCTTCTTCAGGACATTGTTCCAACGCAGATGGGGAATGAGGAGAATGAAGATCGTGTGTAG 1197 0.4962 MEEKREKEKNSKSSSSTMANSVAFSDEIPNMSMSFPFSPAFSSSIFDMMPPPPPSSSHDPKAPNFANSFMDLLAVPADYYTPSLFDWSQNTAPTSAPPPSTTQINHPLPSPASSNVPDGSEVLNTPASPNSSSISSSSNEAAAATTANKTTGNDNEEEEDETAIDATAGREEEDHQDQDKTKKQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTTATCGVKKRVERSSEDPTVVVTTYEGQHTHPCPATSRASFGFMHSEASGFGPTSGLGSAHFMLQQQQQFRDQAQAQAAMLYNSTSSSLSLPLNVVNSASCVNNSYANTSSLSGFLQGQENHQRGFVPSRVVAPHIFLRDNGLLQDIVPTQMGNEENEDRV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00330 398 ProSiteProfiles WRKY domain profile. 206 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00330 398 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 387 IPR044810 GO:0003700
Gma17g00330 398 SMART WRKY_cls 211 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00330 398 Gene3D WRKY domain 198 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g00330 398 MobiDBLite consensus disorder prediction 168 184 - -
Gma17g00330 398 Pfam WRKY DNA -binding domain 212 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00330 398 MobiDBLite consensus disorder prediction 83 99 - -
Gma17g00330 398 MobiDBLite consensus disorder prediction 83 200 - -
Gma17g00330 398 SUPERFAMILY WRKY DNA-binding domain 203 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g00330 398 MobiDBLite consensus disorder prediction 46 65 - -
Gma17g00330 398 MobiDBLite consensus disorder prediction 106 151 - -
Gma17g00330 398 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 66 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00330 Gma-Chr17 2640244 2642569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00330 98 393 WRKY Transcription Factor Family AT2G47260 45.638 1.64e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g00330 WRKY 2.2e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00330 17 2640244 2642569 Gma17g00330 17 2640244 2642569 ECH
Gma17g00330 17 2640244 2642569 Gma02g01050 02 11412483 11419700 PCT
Gma15g01294 15 11439022 11441703 Gma17g00330 17 2640244 2642569 PCT
Gma09g00307 09 2892701 2894263 Gma17g00330 17 2640244 2642569 PCT