Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01411 ATGAGAGTTCCCAATTGTTCATCATTCTTCACTCTACCCCTACGTCATTTCATTACCTTAGCAAACACATTGGGTTTCATTCTCTTGATCTTGTTCATATCTGGGATCATTGAGTTCCCCTCTTTTTCTTTATTATCACAATTCTCAACCCAACCAATCAAAGACCAATCAAAGGCTTTCACCGACGTGGTTGGTGCATTCAAAAAGTGGGACTCCGAAGTGGGGTGTGCCCGATTCAAGAAAGAGATAAACCAACAAAGAAATGGTTCAAATTATGGTTTTTCTACTTCTTTGCAAGATCAATTTGGTGGCCAATTGGAATGTGGGGTGCTGAAAATGAAACATGTGAGCATCTTGGTGAAAGGGTGGACATGGATTCCTGACAATTTAAATAACATGTACATTTGCCCATGTGGATTGAGTTGCTTGTGGACAAAATCACTGGTTCTTGCTGACAACCCTGATGCCTTCTTGTTTGAAACGACTAAACCTCCGGCACAAAGAAGCATTGGACAACCACTTCGTGTATACATGGACCTTGAACCTAAAAGAAAGCGATCAGGTCGTGAAGAAATATTTATTAGTTATCATGCTAAAGATGATTTGCAATCAACCTATGCCAGTTCCCTATTCCATAATGGTCGAAATTACCATATTTCTTCCCATAAGAACAATGTCCCACTTGTTTATTGGTCTTCTTTCCCTTGTACAACTCAAAGGAACAAACTTGCCCACAAAATCCTTAGTTTATTGCCTCACCATTCACTTGGCAAATGCCTAAATAATGTTGGAGGAAAAAATAAGGCACCACGTTTATATCCTGAATGTGTAGATAATGCTGCAAAACTTACCAAATGGTGGAATCATTTACACTGTGTGATGTCTCACTACAAGTTTGTCCTTGTAATTGAGGGCACTTGGACTGAGAGTTATATTACAGAAAAGATATTTTATGCCTTAGACTCTGGTGCAATTCCAATCTATTTTGGTGCTCCAAATATCATGGATTTTGTCCCTCCTCATTCAATAATAGAAGGGGTGAAATTCAAGTCAATGGAAGAATTGGCTTCGTATGTGAAGGCCATAGCAGATGATCCAATAGCCTATGGAGAATTCCATGCATGGAGAAGATGTGGTGTGTTGGGTAACTATGCAAAAACTAGAGCACTGAGCCTTGACACCTTACCTTGTCGGTTATGTCATGCTATTAGCAAAAAAGGGGGAAGAAATGCAGATGCCTAG 1242 0.3969 MRVPNCSSFFTLPLRHFITLANTLGFILLILFISGIIEFPSFSLLSQFSTQPIKDQSKAFTDVVGAFKKWDSEVGCARFKKEINQQRNGSNYGFSTSLQDQFGGQLECGVLKMKHVSILVKGWTWIPDNLNNMYICPCGLSCLWTKSLVLADNPDAFLFETTKPPAQRSIGQPLRVYMDLEPKRKRSGREEIFISYHAKDDLQSTYASSLFHNGRNYHISSHKNNVPLVYWSSFPCTTQRNKLAHKILSLLPHHSLGKCLNNVGGKNKAPRLYPECVDNAAKLTKWWNHLHCVMSHYKFVLVIEGTWTESYITEKIFYALDSGAIPIYFGAPNIMDFVPPHSIIEGVKFKSMEELASYVKAIADDPIAYGEFHAWRRCGVLGNYAKTRALSLDTLPCRLCHAISKKGGRNADA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01411 413 PIRSF FucT_plant 12 413 IPR017177 -
Gma16g01411 413 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 23 413 - -
Gma16g01411 413 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 23 413 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gma16g01411 413 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 223 406 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gma16g01411 413 Gene3D - 177 381 IPR038577 -
Gma16g01411 413 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 110 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01411 Gma-Chr16 33105052 33109551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01411 12 411 Xyloglucan Fucosyltransferase1 AT1G71990 63.300 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01411 K14412 - gmx:100792965 852.432