Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02612 ATGACGGAGTCAGAAGAAGCTGGGGCAAAGCCAATGAACACATTGGGTGGCCAAGTCTGCCAGATCTGTGGTGATAATATTGGGAACAATGTGAATGGCGATCCTTTCATTGCTTGCGATGTTTGTGCTTTCCCTGTCTGCAGGGCGTGCTATGAATATGAAAGGAAGGATGGAAATCAGTCTTGCCCTCAGTGCAAGACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGAGACCAGGAAGAGGATGGGGTTGCTGATGAGGGTGCTAGTGACTTAAATTACAATTCAGAAAATCAGAATGAAAAACAGAAGATTGAGCGCATGTTGGGCTGGCAAATGGCACATGGGCGAGCAGAGGAGGCTGTTGCTCCAAATTATGATAAGGAAGTTTCTCACAATCACATTCCTCTGCTCTCTGGTGGACAAGAGGTTTCTGGAGAATTATCTGCAGCCTCACCTGAGAGGCTGTCAATGGCATCTCCAGGTGGCCGAGGGAAGCGTGTCCATAATCTTCAATATTCCTCTGACCTTAATCAATCACCAAATATTAGGGTTGGGGATCCTGGATTGGGTAATGTGGCATGGAAAGAAAGAGTTGATGGCTGGAAAATGAAGCAAGATAAGAATGTTGCTCCAATGAGCACAGGCCAAGCTACTTCTGAAAGAGGAGCTGGAGATATTGATGCTAGTACTGATGTGCTTGTGGACGATTCCTTGTTGAATGATGAAGCTCGGCAACCCCTCTCTAGGAAGGTTTCTATTCCATCATCTAGGATCAATCCATATCGTATGGTCATTGCTCTGCGGCTGGTTATCCTATGCATTTTTCTGCATTATCGGATAACAAATCCTGTGCCCAATGCATATGCATTGTGGTTGATATCAGTCATATGTGAGATTTGGTTTGCCATATCGTGGATATTTGATCAATTCCCCAAGTGGCTCCCTGTGAACCGTGAAACCTATCTTGACAGACTTGCACTAAGATATGATCAGGAAGGGGAACCATCACAGCTAGCAGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAAGAACCCCCACTTGTGACTGCGAACACTGTCCTATCTATTCTTTCTGTTGACTACCCAGTGGATAAGGTCTCATGTTATGTCTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTGGCTGAGACATCAGAGTTTGCTAGGAAATGGGTTCCTTTCAGCAAGAAATATAACATTGAACCTCGGGCACCTGAGTGGTATTTTGCACAGAAGATTGACTACTTGAAAGATAAGGTTCAACCATCATTTGTCAAAGATCGTAGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGCGTCAATGGACTTGTTGCGAAGGCACAAAAGGTTCCTGAAGAAGGATGGGTGATGCAAGATGGTACGCCATGGCCTGGAAACAACACTAGAGACCATCCAGGAATGATTCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACCGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAACGTCCAGGGTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCACTTGTTCGAGTCTCAGCAGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGGAAAAATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGCAATACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGATGTGTCTTTAATAGAACAGCTTTGTATGGCTACGAGCCTCCTATTAAACCCAAGCATAAAAAGCCTGGGTTGCTTTCTTCACTCTGTGGTGGTAACCGAAAGAAGAGATCAAAATCTAGCAAGAAAGGCTCAGACAAGAAAAAATCTAGCAAGAATGTTGACCCAACTGTGCCCATCTTTAGTCTTGAGGATATAGAAGAGGGGGTGGAAGGTGCTGGATTTGATGATGAGAAATCACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCTGTCTTTGTTGCCTCTACACTCATGGAGAATGGTGGTGTTCCTCAGTCTGCAACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGTTGTGGTTATGAGGATAAAACAGAATGGGGAAGTGAGATTGGATGGATTTATGGTTCTGTCACAGAAGATATTCTTACTGGATTCAAGATGCATGCCCGTGGTTGGAGGTCTATATACTGCATGCCCAAGCTCCCAGCGTTTAAAGGTTCTGCTCCTATCAATCTTTCAGACCGTCTGAACCAAGTGCTTCGATGGGCTTTAGGTTCGGTGGAAATTCTTTTTAGTCGACACTGTCCCATCTGGTATGGTTATAGTGGAAGGCTAAAGTGGCTCGAGAGGTTCGCATATGTGAACACCACAATCTATCCAGTCACTTCCATTCCCCTTCTCATGTATTGTACCTTACCTGCTGTCTGTCTCCTGACTAACAAGTTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTTATCTCTCTCTTTCTTTCCATCTTTGCAACCGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGAATTGATGAGTGGTGGAGAAATGAACAATTTTGGGTTATTGGTGGTGTTTCGGCCCATCTTTTTGCCGTGTTCCAAGGTTTACTCAAAGTGCTTGCTGGAATTGACACTAACTTCACCGTTACCTCAAAGGCATCAGATGAGGATGGAGACTTCGCAGAACTCTACTTGTTCAAATGGACAACCCTTCTCATCCCACCCACGACACTTCTCATCATAAACCTGGTGGGGGTTGTTGCAGGCATCTCCTATGCCATCAACAGTGGTTACCAATCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTCTACCCCTTCCTCAAAGGTCTCATGGGTCGCCAGAACAGAACACCAACCATTGTTGTAGTCTGGTCCATTCTTCTTGCATCCATTTTCTCTCTGCTGTGGGTCCGAATCGACCCGTTTACGACAAGAGTCACTGGTCCTGATGTTGAGCAGTGTGGAATCAACTGCTAG 3222 0.4426 MTESEEAGAKPMNTLGGQVCQICGDNIGNNVNGDPFIACDVCAFPVCRACYEYERKDGNQSCPQCKTRYKRHKGSPAILGDQEEDGVADEGASDLNYNSENQNEKQKIERMLGWQMAHGRAEEAVAPNYDKEVSHNHIPLLSGGQEVSGELSAASPERLSMASPGGRGKRVHNLQYSSDLNQSPNIRVGDPGLGNVAWKERVDGWKMKQDKNVAPMSTGQATSERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIALRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRVNGLVAKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGLLSSLCGGNRKKRSKSSKKGSDKKKSSKNVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYSGRLKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02612 1073 MobiDBLite consensus disorder prediction 644 679 - -
Gma15g02612 1073 ProSiteProfiles Zinc finger RING-type profile. 20 66 IPR001841 -
Gma15g02612 1073 MobiDBLite consensus disorder prediction 76 102 - -
Gma15g02612 1073 PANTHER CELLULOSE SYNTHASE 5 1073 - -
Gma15g02612 1073 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1073 - -
Gma15g02612 1073 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 466 636 IPR029044 -
Gma15g02612 1073 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Gma15g02612 1073 Pfam Cellulose synthase 345 1066 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma15g02612 1073 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Gma15g02612 1073 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Gma15g02612 1073 SUPERFAMILY Nucleotide-diphospho-sugar transferases 359 886 IPR029044 -
Gma15g02612 1073 SUPERFAMILY RING/U-box 5 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02612 Gma-Chr15 54425164 54433884 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01772 13 32984653 32994443 Gma15g02612 15 54425164 54433884 PCT