Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02480 ATGGTCGTTGATAAAATGGCTTCGACCCTTTTAACAAAGATGCTTTTGGGTCACCGATTGATACACCCTTCTTCGTTCCTCACTCACCAGCCACAGATTCTCTCTTCTCTATTCAGTAAACGGCTGTTTTGTATACGAGCTGTCCCGGTCTCAGCCTCTACATCCCAAAACATCAAAACAACTGGTTGGGCTCCTTGTATGGCTTCTTCCTCAGTTGGTAGAAGAGCTACATATTCAACACAATCTGTATCGACAAATGAGCCAGTTGTATCTGTAGATTGGCTTTATGATAACCTGAAGGAGCCAGATATCAAGGTACTAGATGCTTCGTGGTACATGCCGGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGTGCCCTTTTCTTTGATGTAGATGGAATAGCAGATCGGACTACAAAATTACCACACATGCTGCCATCAGCGGAAGCGTTTGCTGCTGCTGTTTCTGCTCTTGGCATAGAGAACAAAGATGATTTGGTTGTTTATGATGGAAAAGGATTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTATTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGCCTGCCGAGATGGCGTGCATCAGGTTATGATGTTGAATCCAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCTACTGAGGCTATAGAGAAAGTATATAAGGGACAAACAGTTGGCCCACTCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGAACATTGATCAGGTAAAGAAAAATATAGAGGACAAAACTCACCAACACATAGATGCTCGATCAAAGCCTAGATTTGATGGAACTGTACAAGAGCCTCGAAAGGGAATCAGAAGTGGTCATGTACCTGGTAGCAAATGCATCCCTTTTGCACAGTTGTTAGATAGTTCACAGACATTGTTACCAGCAGATGAGTTGAAGAAGCGATTTGAACAAGAAGGCATCTCTCTGGAAAGCCCAGCTGTGACTTCATGTGGAACAGGCGTAACTGCTTGCATTCTTGCATTGGGTCTTCATCGTCTTAGAAAGTCTGATGTTGCAGTTTATGATGGATCTTGGACTGAATGGGGAGCACAATCAAATACACCTGTTGACACTTTATGA 1155 0.4329 MVVDKMASTLLTKMLLGHRLIHPSSFLTHQPQILSSLFSKRLFCIRAVPVSASTSQNIKTTGWAPCMASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSAEAFAAAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIEKVYKGQTVGPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPRFDGTVQEPRKGIRSGHVPGSKCIPFAQLLDSSQTLLPADELKKRFEQEGISLESPAVTSCGTGVTACILALGLHRLRKSDVAVYDGSWTEWGAQSNTPVDTL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02480 384 CDD TST_Repeat_2 259 375 - -
Gma15g02480 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 261 382 IPR036873 -
Gma15g02480 384 SMART rhod_4 90 214 IPR001763 -
Gma15g02480 384 SMART rhod_4 258 379 IPR001763 -
Gma15g02480 384 Gene3D - 254 381 IPR036873 -
Gma15g02480 384 Gene3D - 81 224 IPR036873 -
Gma15g02480 384 ProSiteProfiles Rhodanese domain profile. 268 382 IPR001763 -
Gma15g02480 384 Pfam Rhodanese-like domain 91 210 IPR001763 -
Gma15g02480 384 Pfam Rhodanese-like domain 261 375 IPR001763 -
Gma15g02480 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 87 219 IPR036873 -
Gma15g02480 384 PANTHER THIOSULFATE SULFERTANSFERASE 70 382 IPR045078 GO:0016783
Gma15g02480 384 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 70 382 - -
Gma15g02480 384 ProSitePatterns Rhodanese C-terminal signature. 363 373 IPR001307 GO:0004792
Gma15g02480 384 ProSiteProfiles Rhodanese domain profile. 100 217 IPR001763 -
Gma15g02480 384 ProSitePatterns Rhodanese signature 1. 124 135 IPR001307 GO:0004792
Gma15g02480 384 CDD TST_Repeat_1 89 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02480 Gma-Chr15 52335393 52343575 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02480 15 52335393 52343575 Gma15g02480 15 52335393 52343575 ECH