Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02459 ATGAAGGAGAGTGGTAGAAAACAAGGTACCATGTCGCCATGTGCGGCGTGCAAGCTTCTTCGAAGGAGATGCACGCCAGATTGCGCGTTTGCTCCTTATTTTCCAGCTGATGAACCCCAGAAGTTTGATAGTGTTCACAAGGTTTTCGGGGCTAGCAATGTAAACAAAATGTTAAAGGAATTACCTGAACACCAAAGAAGTGATGCGGTTAGTTCAATGGTATATGAAGCCAAAGCCAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTTCAACAACAAGTTGATGTGCTCCAAACCCAATTGGCACTGGCACAAGCAGAGGTTGTACACATGAGAATGCGCCAATTCTCACCACTATCAGATCAACAACAACAACCCTCAGTGCTTCCTGAAGCCTCCAATGCATCATCAGAGAACTTGTACCACTCAAGCAGGCTCTTGTCTTCACAAACCAAGTCCCTTTTTAGCATGGACATGGTCGTTGATCAGGCCAACATGGGGCAATCCTTGTGGTCATACTAG 537 0.4693 MKESGRKQGTMSPCAACKLLRRRCTPDCAFAPYFPADEPQKFDSVHKVFGASNVNKMLKELPEHQRSDAVSSMVYEAKARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRQFSPLSDQQQQPSVLPEASNASSENLYHSSRLLSSQTKSLFSMDMVVDQANMGQSLWSY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02459 178 Coils Coil 92 112 - -
Gma15g02459 178 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Gma15g02459 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 175 - -
Gma15g02459 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 175 - -
Gma15g02459 178 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02459 Gma-Chr15 51872220 51877131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02459 1 177 AS2 family AT1G31320 65.537 4.86e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma15g02459 LOB 2.6e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02459 15 51872220 51877131 Gma15g02459 15 51872220 51877131 ECH