Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02442 ATGGTGGCGCAGGTCCTTAATGCATGGACGAACACGGTAGCGCAACAACCACGACAACAAAGCAAGAAGAGCAGCGACACAGGGGCTAAAGAAGAAAAAGAATATCAGTCGCGTGAGAAATGGAAGCGTTGGAAACAAGGACCTGTCATCAAGATGGTGAAGTTCACAACTCACAGGCTTCGGCACATAATGGACTGCAAACACAATATTCGTAACATGTCTGTTATTGCACACGTCAATCATGGAAAGTCTACCCTCACTGATTCTCTTGTGGCTGCTTCTGGTAATATCATAGCACAAGAGGGTGAAGCTGAGCGTGGCAACACTGTCAAATCCTCTGGTATCTCTCTCTACTATGCGATGCCAGAGGGTGATTTGAAGAATTTCAAAGGGGAACGTGAAGGGAAGGAGTTCCTTATAAATCTCATTGACTCACCAGGGCATGTGGACTTCTCATCTGAGGTCACAACCGCACTTCGCATCACCGATGGAGCACTTGTGGTGGTGGATTGTGTTGAGGGTGTCTGTGTCCAGACCGAAACTGTGCTGAGACAAGCCCTTGGAGAAAGGGTTAAGCCTGTTTTGGCTCTTAACAAGATGGATAAGTGCTTTCTTGAGCTCAATCTTGATCCAGAGGAGGCATACCTAACACTCCAAAGGGTTGTTGAGAGTGTGAATGTAATCATGGGTAACTATGAAGATGCTCTACTTGGAGATGTTAAGGTGTACCCTGAGAAGGGAACGGTTGCCTTTTCCGCTGGCTTGCATGGATGGGGCTTTACACTCACCAACTTTGCCAAGATGTATGCTTCCATGTTTGGAGTTGATGAGGCCAAGATGATGAGTAGGCTTTGGGGTGAGAATTTCTTTGACTCTGCTACCAAAAAGTGGACCAACAGGCACACTGGGGCTTCTACTTGCAAGCGTGGCTTTGTTCGGTTTTGTTATGAACCAATCAAGCAGGTTATTGAACTCTGCATGAATGACCAGAAGGATAAGTTGTGCCCCTTGTTGCAAAAGCTTGGGTTGAACTTGAAGTTCGAGAAGGAGTTGACAGGGAAGGCTTTGATGAAGTGTGTTATGCAAAGTTGGCTCCCAGCAAGTAGTGCCATTCTGGAGATGATGATATTTCACCTTCCATCTCCGGCTAGTGCTCAGAAATATAGAGTTGAGAATTTGTATGAGGGTCCCCTTGATGACCCTTACGCTTCTGCTATCAGAAATTGTGACCCTGAAGGGCCCCTAATGCTTTATGTGTCAAAGATGATTCCTACATCTGATAAGGGAAGGTTTTATGCTTTTGGCCGAGTCTTCTCTGGGAAGGTGTCAACTAATATGAAGGCTAGAATTATGGGGCCAAATTTTGTTCCTGGGGAGAAGAAAGACCTGTATGTGAAGAGTGTTCAGGGGACTTCAATTTGGATGGGGAAGAAATATGAAACAGTTGAGGATGTTCCTTGTGGAAACACAGTTGCCTTGGCTGGTTTGGACCATTTCATCACCAAGAATGCTACTATAACAAATGAGACAGAAATTGAAGCACACCCCATTAGAGCTATGAAGTTTTCTGTGTCACCATTGGTAAGTGTAGCTGTTAACTGCAATGCTGCATCAGATCTTCCTAAGCTTGTTGAGGGCCTAAAACGTTTGGCAAAGTCAGACCCCATCATGATGTGCACAATTTCAGAAACTGGAGAACACATCATAGGTGCTACTGGTGAGCTGCATCTTGAAACATGCGTAAAAGACTTGAAGGACGATTTTATGAATGGGATTGAGATTTCAATATCTGACCCTATTGTCTCCTTCAAGGAGACAGTGCTGGAGAAGTCTTGCCACACTGTGATGAGCAAATCACCTAACAAACACAACCGTTTGTACATGGAAGCAAGGCCAATGGAGGAAGGGCTTGTGGAGGCCATTGAGAGAGGCAAGATTGGTCCAAAGAATAACAACAAAATGGTGTGTGAAGAGTTTGGTTGGGACAAGGATCTAGCCAAGAGAATATGGTGTTTTGGCCCTGATACCATTGGACCCAACATGATGGTGGATGCATGTAAGGGAGTTCAGTACCTCAATGAAATGAAGGAGGCTGTTCTTGCTGGCTTTCAGATAGCATCAAGAGAAGGTCCACTTGCAGAAGAGAACTTGAGAGGGGTATGCTTTGATCTTTGTGATGTTGTACTTCATGCTGATACAATCCATAGGGGAGGTGGCCAAATCATTCCAACTGCTAGAAGGGCTTTCTATGCTGCCATACTTTCAGCTAAGCCAAGACTACTTGAGCCTGTGTATGTGATGGAAATACAAGCACATGAAAAGGCTCTTGGTGGCATCAATAGTGTTGTTAACAAGAAAAGAGGGCATGTGTTTGAGGAAATTCAGAGGCCTGGCACCCCATTTTACAATGTCAAGGCATATATACCAGTGATTGAGTCATTCAAATTCAGTGAAACACTGAGGACTCAAATTGGAGAGCAGGCTTTCCCACAGATGGTGTTTGATCACTGGGATATGGTGCAGTCTGATCCACTGGAACCTGGAACACCAGCTTCTGCATGTGTTGCTGACATTCGGAAGAAGAAAGGGTTGAATGAACAAGTTATGCCTTTGTGTGTGTTCGAGGACATGCTTTGA 2637 0.4501 MVAQVLNAWTNTVAQQPRQQSKKSSDTGAKEEKEYQSREKWKRWKQGPVIKMVKFTTHRLRHIMDCKHNIRNMSVIAHVNHGKSTLTDSLVAASGNIIAQEGEAERGNTVKSSGISLYYAMPEGDLKNFKGEREGKEFLINLIDSPGHVDFSSEVTTALRITDGALVVVDCVEGVCVQTETVLRQALGERVKPVLALNKMDKCFLELNLDPEEAYLTLQRVVESVNVIMGNYEDALLGDVKVYPEKGTVAFSAGLHGWGFTLTNFAKMYASMFGVDEAKMMSRLWGENFFDSATKKWTNRHTGASTCKRGFVRFCYEPIKQVIELCMNDQKDKLCPLLQKLGLNLKFEKELTGKALMKCVMQSWLPASSAILEMMIFHLPSPASAQKYRVENLYEGPLDDPYASAIRNCDPEGPLMLYVSKMIPTSDKGRFYAFGRVFSGKVSTNMKARIMGPNFVPGEKKDLYVKSVQGTSIWMGKKYETVEDVPCGNTVALAGLDHFITKNATITNETEIEAHPIRAMKFSVSPLVSVAVNCNAASDLPKLVEGLKRLAKSDPIMMCTISETGEHIIGATGELHLETCVKDLKDDFMNGIEISISDPIVSFKETVLEKSCHTVMSKSPNKHNRLYMEARPMEEGLVEAIERGKIGPKNNNKMVCEEFGWDKDLAKRIWCFGPDTIGPNMMVDACKGVQYLNEMKEAVLAGFQIASREGPLAEENLRGVCFDLCDVVLHADTIHRGGGQIIPTARRAFYAAILSAKPRLLEPVYVMEIQAHEKALGGINSVVNKKRGHVFEEIQRPGTPFYNVKAYIPVIESFKFSETLRTQIGEQAFPQMVFDHWDMVQSDPLEPGTPASACVADIRKKKGLNEQVMPLCVFEDML 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02442 878 Pfam Elongation Factor G, domain III 526 588 IPR041095 -
Gma15g02442 878 Pfam Elongation factor G C-terminus 759 845 IPR000640 -
Gma15g02442 878 Gene3D - 54 276 IPR027417 -
Gma15g02442 878 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 52 877 - -
Gma15g02442 878 SUPERFAMILY EF-G C-terminal domain-like 523 599 IPR035647 -
Gma15g02442 878 MobiDBLite consensus disorder prediction 10 40 - -
Gma15g02442 878 PRINTS GTP-binding elongation factor signature 193 202 IPR000795 GO:0003924|GO:0005525
Gma15g02442 878 PRINTS GTP-binding elongation factor signature 157 168 IPR000795 GO:0003924|GO:0005525
Gma15g02442 878 PRINTS GTP-binding elongation factor signature 72 85 IPR000795 GO:0003924|GO:0005525
Gma15g02442 878 PRINTS GTP-binding elongation factor signature 141 151 IPR000795 GO:0003924|GO:0005525
Gma15g02442 878 Gene3D - 755 864 - -
Gma15g02442 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 380 IPR027417 -
Gma15g02442 878 CDD EF2_II 414 509 - -
Gma15g02442 878 Gene3D Elongation Factor G (Translational Gtpase), domain 3 524 602 - -
Gma15g02442 878 SUPERFAMILY EF-G C-terminal domain-like 762 864 IPR035647 -
Gma15g02442 878 TIGRFAM small_GTP: small GTP-binding protein domain 71 214 IPR005225 GO:0005525
Gma15g02442 878 Pfam Elongation factor Tu GTP binding domain 68 381 IPR000795 GO:0003924|GO:0005525
Gma15g02442 878 SMART EFG_IV_2 644 757 IPR005517 GO:0005525
Gma15g02442 878 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 68 383 IPR000795 GO:0003924|GO:0005525
Gma15g02442 878 MobiDBLite consensus disorder prediction 24 40 - -
Gma15g02442 878 Pfam Elongation factor G, domain IV 649 757 IPR005517 GO:0005525
Gma15g02442 878 Gene3D Translation factors 382 523 - -
Gma15g02442 878 Gene3D - 608 754 IPR014721 -
Gma15g02442 878 CDD EF2 71 270 - -
Gma15g02442 878 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 52 877 - -
Gma15g02442 878 CDD eEF2_snRNP_like_C 762 840 - -
Gma15g02442 878 CDD EF2_snRNP_III 526 598 - -
Gma15g02442 878 CDD aeEF2_snRNP_like_IV 598 765 - -
Gma15g02442 878 SUPERFAMILY Translation proteins 381 516 IPR009000 -
Gma15g02442 878 SMART EFG_C_a 759 848 IPR000640 -
Gma15g02442 878 SUPERFAMILY Ribosomal protein S5 domain 2-like 601 761 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02442 Gma-Chr15 51664250 51669605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02442 52 878 Eukaryotic Initiation Factors Gene Family AT1G56070 74.526 0.0 1336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02442 15 51664250 51669605 Gma15g02442 15 51664250 51669605 ECH