Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02438 ATGGCCGTTGAAGCGCGCCATCTCAATCTCTTCCCTTCTCAACTCATCACCAACCGGCAAGTGATGGATTCTGGTGAGGCGAATATGATGAACATGTACAACAACAGCACTCCGATTGGTGGTTACTCTTCGTTTCTGCCGTTATCCGGCGCCGTCACGGAGACGGCGCTTCCGTCCTCGGTTTTCAACCATTCTCTCGCCAACGCCGTCAAATCCGAAAGCGGCGTTACCTacaacaacaacaacaacaacaacaacGTTTCTGTTTCTCCCATGTCGAGAAAGCGTTCCCGAGATAATAACAACAATTACGGTTACAACAACAACAACAACGATTCATTTTCGTTTCTCGGCCAAGACGTTTCTCTCCAGATCCAGCAGCAGCAACTCGACATCGAGCATTTAATCATGCAACGCATGGAGAAGGTGAGAATGGAGATTGATGAGAAGAGGAAGAGGCAAGCGAGGAGGATCATTGAAGCGATTGAGGTTGGAGTGATGAAGAAGCTGAAGACGAAGGAAGAGGAGATAGAGAAAATCGGAAAACTGAATTGGGCGTTGGAAGAGAAAGTGAAGCATCTCTGCATGGAGAATCAGGTGTGGCGTAACATAGCGGAAACCAACGAAGCCACAGCGAATGCTCTGCGGTGTAATTTAGAGCAGGTTCTCGCGCAGCGCGGCGGAATGGCGGCGGAGGAAGACGTCGGCGGAGGCGCCACCGTGTGCGGCGGCGCGGAGATGGACGACGCCGAGTCCTGCTGCGGGAGCACCGAGGAGGACGGTTTAGAAAAGGAAACGGGGGGTTGGCGCACGTTAGCGGGGTGCGCAGGGGTGAAGGATAAGGAGGGTGGTGGTAATGGGAGGTTGTGCAGGAACTGTAGGAAGGAAGAGTCTTGTGTGCTGATTTTGCCGTGCCGTCATTTGTGCTTGTGTACTGTGTGTGGGTCTTCACTCCACATTTGTCCCATTTGTAAATCCTATAAGACTGCTAGTGTGCATGTTAACATGTCCTAA 1014 0.5059 MAVEARHLNLFPSQLITNRQVMDSGEANMMNMYNNSTPIGGYSSFLPLSGAVTETALPSSVFNHSLANAVKSESGVTYNNNNNNNNVSVSPMSRKRSRDNNNNYGYNNNNNDSFSFLGQDVSLQIQQQQLDIEHLIMQRMEKVRMEIDEKRKRQARRIIEAIEVGVMKKLKTKEEEIEKIGKLNWALEEKVKHLCMENQVWRNIAETNEATANALRCNLEQVLAQRGGMAAEEDVGGGATVCGGAEMDDAESCCGSTEEDGLEKETGGWRTLAGCAGVKDKEGGGNGRLCRNCRKEESCVLILPCRHLCLCTVCGSSLHICPICKSYKTASVHVNMS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02438 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 336 IPR017066 -
Gma15g02438 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Gma15g02438 337 Pfam Zinc finger, C3HC4 type (RING finger) 288 326 - -
Gma15g02438 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
Gma15g02438 337 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 336 - -
Gma15g02438 337 MobiDBLite consensus disorder prediction 74 109 - -
Gma15g02438 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 337 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02438 Gma-Chr15 51598708 51600179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02438 283 326 Miscellaneous Gene Families AT4G39050 38.636 1.27e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02438 15 51598708 51600179 Gma15g02438 15 51598708 51600179 ECH