Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02430 ATGGCGAAACCTGGGCGAGGTCGTCGCTCTCCCTCCGGTTCCGTTTCCGgctcctcctctcgctcctcttccccctccgactctcgttcctcctctcgctcGCGCTCCCTTTCTCGGTCCCGTTCTCCCTCGCGCTCCAGATCCTCTTCCCCCTCCTCCTCCTCTTCCTCCCGAAGCTCCCGCAGCCGCAGCCCTCCCCCGCAGAGGCGCCGAAGTCCTGCTGACGCAACTAGGCGAGGTCGGTCTCCTCCACCTCAGTCTAAGAGAGCTTCACCTCCCCCAAGGAAACCTTCTCCTGTACGCGAGTCACTTGTTCTTCATGTAGAAAAGCTCAGCAGAAATGTCAATGAAGGGCACTTGAAAGAAATTTTCAGTAACTTTGGTGAGGTTATAAGTGTCGAGTTGGCAATGGATCGAACTGTCAATCTTCCAAAAGGGTATGGATATGTGCAGTTCAAGACAAGAGGGGATGCTGAAAAGGCATTATTGTACATGGATGGTGCCCAAATAGATGGCAATGTCATCAAGGCAAGATTTACTCTACCTCCAAGGCAGAAAGTTTCACCACCCCCAAAGGCTTCTGCTGTTGCTCCAAAGAGAGACACCCCCAGGGCTGATAATGCTAGTGCAGATGTTGACAAGGATGGACCAAAGCGGCAAAGAGAATCTTCTCCTCGTAGAAAACCTCCTCCCTCACCACGGAGGAGATCTCCTGTACCTAGAAGAGCTGGATCTCCAAGACGACCAGATTCTCCACGTCGCCGTGCAGATTCTCCTGTTCGTCGCCGATTAGACTCTCCTTATCGTCGTGGAGGAGACACACCTCCTAGGAGGCGGCCTGTGTCTCCTGGAAGAGGTCGTTCTCCATCTCCACCTAGACGCCTTAGATCCCCTGCAAGGCTGTCACCTAGAAGGATACGTGGAAGTCCAGGTCGAAGACGTTCACCTCCACCTCCTCCCAGGCGCCGATCACCACCTAGACGACCACGTAGTCCTCCTAGAAGGTCTCCAATTGGTCGTAGACGTACTCGCTCTCCAATACGTAGGTCTGCACGCTCACGCTCAAGGTCATTCTCACCTCGCAGAGGTAGACCACCAGTTAGACGTGGAAGGTCATCATCCTACTCTGATTCACCTAGTCCACGCAAGGTATCCCGGAGATCAAAGAGTCGGAGCCCAAGAAGGCCTTTGAGAGGAAGAGGCAGTAGCAACAGCAGCAGCAGCAGTTcaccaccaccaccaccaccaccaccaACTCGCAAGCCATAG 1269 0.5059 MAKPGRGRRSPSGSVSGSSSRSSSPSDSRSSSRSRSLSRSRSPSRSRSSSPSSSSSSRSSRSRSPPPQRRRSPADATRRGRSPPPQSKRASPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVISVELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVIKARFTLPPRQKVSPPPKASAVAPKRDTPRADNASADVDKDGPKRQRESSPRRKPPPSPRRRSPVPRRAGSPRRPDSPRRRADSPVRRRLDSPYRRGGDTPPRRRPVSPGRGRSPSPPRRLRSPARLSPRRIRGSPGRRRSPPPPPRRRSPPRRPRSPPRRSPIGRRRTRSPIRRSARSRSRSFSPRRGRPPVRRGRSSSYSDSPSPRKVSRRSKSRSPRRPLRGRGSSNSSSSSSPPPPPPPPTRKP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02430 422 CDD RRM_RNPS1 106 178 IPR034201 -
Gma15g02430 422 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 108 176 IPR000504 GO:0003723
Gma15g02430 422 SUPERFAMILY RNA-binding domain, RBD 90 190 IPR035979 GO:0003676
Gma15g02430 422 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 104 182 IPR000504 GO:0003723
Gma15g02430 422 MobiDBLite consensus disorder prediction 1 101 - -
Gma15g02430 422 MobiDBLite consensus disorder prediction 204 229 - -
Gma15g02430 422 Gene3D - 9 188 IPR012677 -
Gma15g02430 422 MobiDBLite consensus disorder prediction 298 368 - -
Gma15g02430 422 SMART rrm1_1 105 178 IPR000504 GO:0003723
Gma15g02430 422 PANTHER BNAA09G56240D PROTEIN 1 404 - -
Gma15g02430 422 MobiDBLite consensus disorder prediction 11 67 - -
Gma15g02430 422 MobiDBLite consensus disorder prediction 181 422 - -
Gma15g02430 422 MobiDBLite consensus disorder prediction 246 276 - -
Gma15g02430 422 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 1 404 - -
Gma15g02430 422 MobiDBLite consensus disorder prediction 408 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02430 Gma-Chr15 51506082 51511188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02430 106 179 Eukaryotic Initiation Factors Gene Family AT2G23350 32.432 7.43e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02430 15 51506082 51511188 Gma15g02430 15 51506082 51511188 ECH