Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02407 ATGTTAATTTTGGTGGGGAACGTGCAGGGAACAATGAGTTCTCTTGCTTCTCCAGTGAGTTTGGGGAGCCTCATGGGTGTGAGTTCATCTGGAAGGGCCCATTCTATGGTGAGGAGGGTCTCTCTTTCAAGAGGGAACTGTAGGGGGAGAAAGAGATGGCATTGTGTGTCATTGTCTGTGTGTAGATATTCAGTGACCACAACTGATTTTGTTGCTGACCAAGGGAACTCAGTGTCCCTTGATTCTAACAGTAGTAGTAGTAGTAGTAAGGGTGGAGATGATGGTGCTGGTTTTGTGCTTAAGCCTCCTCCTAAGCCTGTGTTGAAGTCCCCAGAGAATAAGAGTGACCCCATTTTGGGGCCCTCAAGGACTATTGGGGACCCTGGGGATGTGGAAGAGAAGAATAAGGTGATTGAATCACTTGGGGAGGTGTTGGAGAAGGCGGAAAAGCTGGGGAGTTCTAAGGTGAATGGTGAAAGGAATAATGGTTCAATGAATAAACCGGTAAGGAGTAATGCAGATGCTAGTCCTAGGGCTGATAAACTGGTGAATTCAGCGGCATATCAGAAGTCTAAAACCATGAAGAGTGTATGGCGTAAAGGGGACACGGTTGCATCGGTGCAGAAGGTAGTGAAGGAAGTGCCAAAGCCTAATAGTAACAAGAATGAAGGGGAGAAGACTCAAACAAGGGGAGGGGAGGAGGTGGTATCCCAAACTCGTGCTcctcaactgcctttgaaacctcaaccgccttcacaacctcaaccgGCGTTGCTATCAAAACCTTCGATAGCTCCCCCACCTGTCAAAAAACCTGTTGTTTTGAGGGACAAGGGAGTATCTGAAACAACATCAGTTAAACCTAAAGAAAAGAAGTCACCCATCTTGATTGATAAATTTGCTTCCAAGAAACCGGTAGTAGATCCTCTAATTGCGCAAGCAGTTCTAGCCCCTCCAAAACCAGGGAAGGGACCTCCCCCGGGAAAGTTTAAAGATGATTTCCGGAAGAAAGGTGCTACGACTGGGGGACCAAGAAGACGGATTTTAGAGGATGATGTGATTCATGATGAGGACGCATCTGAACTCAATGTCTCTATTCCTGGTGCTGCAACAGCAAGAAAAGGAAGGAAATGGAGTAAAGCAAGTCGAAGGGCAGCACGACTCCAGGCTGCCAGGGATGCCGCTCCCGTCAAAGTAGAAATTCTAGAGGTTGGTGACAAAGGTATGCTGGTGGAGGAATTAGCCTACTGTTTGGCAACCAGTGAAGGTGAGATCCTGGGTTATCTGTACTCCAAGGGAATTAAACCAGATGGGGTACAAACAATAGACAAAGATATGGTAAAGATGATTTGTAAAGAGTATGATGTGGAAGTCATAGATGCTGATCCATTCAAAGTTGAAGGTTTGGTGAAGAAAAAAGAAATTCTTGATAAAGATGACCTCGACAAACTCAAAGACAGGCCTCCTGTTATTACTATTATGGGCCATGTAGATCATGGCAAGACAACTCTTTTGGATTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGGGCCTATAAAGTGGAAGTACCTGTTGATGGCAAAAACTTGCCATGTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGAGCAATGAGAGCTCGTGGAGCAAGCGTAACAGACATTGCTATTATTGTTGTGGCTGCTGATGATGGGATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCGGGAGTACCCATAATCATTGCAATAAACAAGGCATGCCAACATGAAATAGATAAAGATGGAGCAAATCCAGAAAGAGTCATGCAAGAGCTTTCTTCAATTGGTTTAATGCCAGAAGACTGGGGCGGTGACATCCCAATGGTTCCGATAAGTGCTCTCAAAGGAAAGAACATAGATGATCTTTTGGAAACTGTTATGCTTGTTGCCGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCGAAGGGAACTGTTGTTGAGGCGGGGCTAGATAAATCAAAGGGACCATTCGCTTCATTTATTGTGCAGAATGGCACCCTCAGACGGGGAGATATAGTAGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGGGTTGATGAAGCTACACCCTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTATTGAATCCCTTGATACTGCACGTGAAAGGGCAGAAACTCGTGCTGAGTCATTGCGTAATGAGCGTATTTCAGCAAAGGCAGGGGATGGAAAGGTCACCCTTTCTTCTTTAGCTTCAGCAGTTTCGTCAGGAAAGCTGTCTGGACTAGATTTGCATCAACTAAATATTATTTTGAAGGTTGATCTTCAGGGATCTATTGAAGCTGTCAGAAAAGCTCTGGAGATTCTACCACAAGACAATGTCACTCTGAAGTTTTTGTTGGAGGCAACAGGTGATGTAAGCACAAGTGATGTGGACCTTGCAGTTGCAAGCAAGGCCATCATTTTGGGATTTAATGTGAAAGCACCAGGCTCTGTGAAAAGCTATGCTGAGAACAAAGCTGTTGAGATTAGATTATATAAAGTTATTTATGAATTGATTGATGATGTACGAAATGCAATGGAAGGACTCCTGGAACCTGTTGAGGAACATGTAACAATTGGTTCAGCAGTAGTACGGGCCGTATTTAGCAGCGGTAGTGGTCGTGTTGCTGGATGTATGGTTACAGAGGGAAAAATACTACAAGACTGTGGTATTCGAGTCAAGCGGAAGGGAAAAGTAGTTCATGTTGGTATTCTTGATTCTTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTAAATGCCGGTCTCGAGTGTGGACTTGGGTTAGAAGACTTTGATGATTGGGAAGAGGGTGACATTCTTGAAGTCTTCAACACAGTTCAGAAGAGGAGGACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTAGGAGTTGCATTGTAG 3063 0.4411 MLILVGNVQGTMSSLASPVSLGSLMGVSSSGRAHSMVRRVSLSRGNCRGRKRWHCVSLSVCRYSVTTTDFVADQGNSVSLDSNSSSSSSKGGDDGAGFVLKPPPKPVLKSPENKSDPILGPSRTIGDPGDVEEKNKVIESLGEVLEKAEKLGSSKVNGERNNGSMNKPVRSNADASPRADKLVNSAAYQKSKTMKSVWRKGDTVASVQKVVKEVPKPNSNKNEGEKTQTRGGEEVVSQTRAPQLPLKPQPPSQPQPALLSKPSIAPPPVKKPVVLRDKGVSETTSVKPKEKKSPILIDKFASKKPVVDPLIAQAVLAPPKPGKGPPPGKFKDDFRKKGATTGGPRRRILEDDVIHDEDASELNVSIPGAATARKGRKWSKASRRAARLQAARDAAPVKVEILEVGDKGMLVEELAYCLATSEGEILGYLYSKGIKPDGVQTIDKDMVKMICKEYDVEVIDADPFKVEGLVKKKEILDKDDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVEVPVDGKNLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKACQHEIDKDGANPERVMQELSSIGLMPEDWGGDIPMVPISALKGKNIDDLLETVMLVAELQELKANPDRSAKGTVVEAGLDKSKGPFASFIVQNGTLRRGDIVVCGEAFGKVRALFDDGGKRVDEATPSIPVQVIGLNNVPIAGDEFEVIESLDTARERAETRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVRKALEILPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVKAPGSVKSYAENKAVEIRLYKVIYELIDDVRNAMEGLLEPVEEHVTIGSAVVRAVFSSGSGRVAGCMVTEGKILQDCGIRVKRKGKVVHVGILDSLRRVKEIVKEVNAGLECGLGLEDFDDWEEGDILEVFNTVQKRRTLEEASASMAAAVEGVGVAL 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02407 1020 Gene3D - 799 904 IPR036925 -
Gma15g02407 1020 CDD IF2_eIF5B 489 660 - -
Gma15g02407 1020 MobiDBLite consensus disorder prediction 244 269 - -
Gma15g02407 1020 Pfam Translation-initiation factor 2 799 892 IPR023115 -
Gma15g02407 1020 SUPERFAMILY Translation proteins 667 750 IPR009000 -
Gma15g02407 1020 CDD IF2_mtIF2_II 671 765 IPR044145 -
Gma15g02407 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 667 IPR027417 -
Gma15g02407 1020 Hamap Translation initiation factor IF-2 [infB]. 7 1000 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Gma15g02407 1020 MobiDBLite consensus disorder prediction 221 236 - -
Gma15g02407 1020 MobiDBLite consensus disorder prediction 74 132 - -
Gma15g02407 1020 Coils Coil 750 777 - -
Gma15g02407 1020 Gene3D - 483 666 IPR027417 -
Gma15g02407 1020 TIGRFAM IF-2: translation initiation factor IF-2 408 1002 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Gma15g02407 1020 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 486 664 IPR000795 GO:0003924|GO:0005525
Gma15g02407 1020 MobiDBLite consensus disorder prediction 326 345 - -
Gma15g02407 1020 PRINTS GTP-binding elongation factor signature 490 503 IPR000795 GO:0003924|GO:0005525
Gma15g02407 1020 PRINTS GTP-binding elongation factor signature 542 552 IPR000795 GO:0003924|GO:0005525
Gma15g02407 1020 PRINTS GTP-binding elongation factor signature 558 569 IPR000795 GO:0003924|GO:0005525
Gma15g02407 1020 PRINTS GTP-binding elongation factor signature 594 603 IPR000795 GO:0003924|GO:0005525
Gma15g02407 1020 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 41 1010 - -
Gma15g02407 1020 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 41 1010 IPR015760 -
Gma15g02407 1020 MobiDBLite consensus disorder prediction 74 92 - -
Gma15g02407 1020 SUPERFAMILY Translation proteins 906 1000 IPR009000 -
Gma15g02407 1020 MobiDBLite consensus disorder prediction 155 171 - -
Gma15g02407 1020 Gene3D Translation factors 667 783 - -
Gma15g02407 1020 CDD mtIF2_IVc 910 992 - -
Gma15g02407 1020 Coils Coil 131 151 - -
Gma15g02407 1020 MobiDBLite consensus disorder prediction 282 298 - -
Gma15g02407 1020 MobiDBLite consensus disorder prediction 315 345 - -
Gma15g02407 1020 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 798 910 IPR036925 -
Gma15g02407 1020 ProSitePatterns Initiation factor 2 signature. 953 975 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Gma15g02407 1020 Pfam Elongation factor Tu GTP binding domain 491 656 IPR000795 GO:0003924|GO:0005525
Gma15g02407 1020 TIGRFAM small_GTP: small GTP-binding protein domain 488 654 IPR005225 GO:0005525
Gma15g02407 1020 MobiDBLite consensus disorder prediction 149 298 - -
Gma15g02407 1020 Gene3D Translation factors 905 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02407 Gma-Chr15 51131214 51140937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02407 487 890 Eukaryotic Initiation Factors Gene Family AT1G76810 29.614 6.58e-29 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02407 15 51131214 51140937 Gma15g02407 15 51131214 51140937 ECH