Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02373 ATGCTCGAACCGCGAGAATCTGATATACCCGTCCTGTTTCTGGTCTTGGTTGTGCTTCCCTTGGTGGCTTACATCTTACTTGGAAAATGGAGTGAAACCACTAAGAAGAGAGATAGGATAAATTTGCTTGCCCATTTGGCTGCTGAAGAAGCTCTGAGAGCTGAAGAAATGGCTGTGGCTGATGTAATTCCTCCAGTGTCTGCTTCAAAAAATGAACATCATGTGTGTGCTAGGTGCTCTGCTCCAGCCAGAACTCGCTGCTCCAGATGCAAAATTGTTAGATATTGCTCTGGAAATTGTCAAATAATCCATTGGAGGCTAAATCACAAGCAAGAATGCCAGCAACTGGAACCTCCTAAATCAAGCTCATTTCCTCTGGCTGTTTCAGTTGAGGAACTTGGTCGTGGGAGTTACTTTTATGAAAATTTGAACAGCCAGTACTTAGGTCCCTCTTTGAAGCAGACTTTAAGGGAGAGTGCACCTTTGGACAATTTGGTTCACCCTCTGACGGGCACTGCTGCTCCTGCTACAGCTGATTTTTCCATATTTAATAATTTTCAACCTTCTGCTTTTGAAAGAACTTCCCATAAATCCAACAGAGAAACATTGAGAAGAGATAATGGGTCTATTTATGAATCTTCTATTGAATCTTCTGATTGTAAAGCTACCAGTTCTCTCTCAAGTGTGGTACCAAAGGAGGCGTTTATGAGACAGAAGTCAAGAAATAGCAATGATTCTGTGTTGGAGGAAGAAATTTCAAATGTCAATTCCGGTGGCTTTGAAGTTTATATTAACAGATTTGATGCATCAAAAAACACAACCCATGAGGATGACAACCATCAAAGTCAATATGGAAATGTATCAGTAACAAGACACAAATATGGACGCCCAAGTGTGTCAAGTGCTTCAAACAATGATAACACTGTAGATGAATTTGAAACAGAGATCACTGCTAGAGGTGTAAATGTAGTCAAAGGGGGAAATTATCATTCTGATGAAGCAGCAAAATACAAACACCCTTCTGAAACAACAATCAAAGGAAGCATGAAAGCTAAAAAGATATTACATACTCCCAAGACCAAATCTTCTAAATCACCAAAGTCAACATCAAAGACATCAGCTGACTTTTGTTGCTCAGAAATAGAAAAGAAAGGGAAAACTGCAGATGAACTAAAAGTTGCTGGAAATAGTGATACTATCCCTTTACATGGTAATGGTAGCAATGGGGTTGCAAGCACTGGAATTATGAAAATGATGGGCTTGAGGAAATCGACAAAACCTACTCCTCTTGCCTCCACAGAAGGCATTGATGTAAAGTGCAAGAAGGTGACAAAGATAAAGATGTTGTTTCCTTATGATGAATTTGTAAAGATTTTTCAGAGTGATGTCTTTGGCATATACCCCAGGGGCCTGTTAAATTGTGGGAACAGTTGCTATGCCAATGCTGTCTTGCAGTGCTTAACTTCTACAAAGCCTCTAGTCATCTATTTGCTTTATAGATCGCACTCAAAAGCTTGTTGTGCTAAAGATTGGTGTCTCATGTGTGAGTTAGAGCAACACATAATGATTTTAAGAGAAAATGGGGCTCCTCTATCTCCTAGTCGGATACTTTGGCATATGCGGAGCATTAACTGCCATATGGGTGAAGGAAGTCAGGAAGATGCCCATGAATTTTTAAGGCTTCTAATTGCATCAATGCAATCTATATGCTTGGAGGGACTTGGTGGTGAGAAAAAAGTTGATCCTAGAATACAAGAAACAACTTTCATACAACATACTTTTGGTGGCCGTCTTCAATCCAAGGTTAAGTGTTTGAATTGTAATCATGAATCAGAAAGGTATGAGAACATTATGGACCTGACCTTGGAGATATTGGGTTGGGTTGAGTCACTGGAAGATGCGCTGACTCAGTTTACTTCCCCTGAAGATTTGGATGGAGAGAATATGTACAGATGTGGAAGGTGCACATCATATGTTCGAGCTAGAAAGCAACTGAGCATACATGAGGCTCCTAACATCTTGACTATAGTTCTGAAGAGATTTCAGGAAGGAAGATATGGGAAAATTAACAAGTGCATAACTTTTCCTGAAATGCTGGATATGATTCCTTTCATGACCGGGACGGGTGATATTCCACCACTTTACATGCTTTATGCTGTTGTTGTGCACCTGGACACACTAAATGCATCTTTCTCTGGACACTATGTTTCATATGTGAAAGATCTGCAAGGCAATTGGTTCAGAATAGATGATGCTGAGGTACAGCCAGTGCTAATTAATCAGGTCATGTCAGAAGGAGCATATATCCTATTCTACATGAGGTCCTGTCCCCGTCCTCCGGTAGAACATACTATGAATGCCATGCAGCAATCTGTTTATGATTCTTCAAAGCACAATCCAATGGAAATGCAGAAACCTAATAAACCAGGACATAGTAGGCATGGCAGTCGTCAGTTTTTTGTCCCAGAGCCATCACCTAATACTAGGCCAGAAATCACCACTCACATTATTGACACCACCAATGGCTTCCTTAGAAAAAGCACCAATAGGAATGCCCTGCCGGTGACCCAAACTTATGCCGAAAACGTCAGGCGTGAGTTTTCAGATGCCACATCAAGTGACTGGTCCCTTTTCACTAGCTCAGATGAGGCTTCTTTCACAACTGAGAGCACCAGGGACTCCTTCAGCACTGTAGACTATGGTGATTCATGCAACATGGATCCAATTTCATCTATCTTCAACTACCCCCCAGAAAAGTCCTACTTGAAGTTTTCACATAGTAGGCCAGTTACCAGGGTCTTCCCTGAAAAGGGTCATGTTAAACAAGTACAGAGGATTGATCATTCCAAAAGGGTCAGCCATTCTTCTTCAAATGAACATCCACCAAATGGGAATTGTGGCATGTATGTATATTATGGGAGTAATCCTGTGTGTGGTACTACCCAGACTTCTAGTCAGTGTGAATTTTAG 2970 0.4104 MLEPRESDIPVLFLVLVVLPLVAYILLGKWSETTKKRDRINLLAHLAAEEALRAEEMAVADVIPPVSASKNEHHVCARCSAPARTRCSRCKIVRYCSGNCQIIHWRLNHKQECQQLEPPKSSSFPLAVSVEELGRGSYFYENLNSQYLGPSLKQTLRESAPLDNLVHPLTGTAAPATADFSIFNNFQPSAFERTSHKSNRETLRRDNGSIYESSIESSDCKATSSLSSVVPKEAFMRQKSRNSNDSVLEEEISNVNSGGFEVYINRFDASKNTTHEDDNHQSQYGNVSVTRHKYGRPSVSSASNNDNTVDEFETEITARGVNVVKGGNYHSDEAAKYKHPSETTIKGSMKAKKILHTPKTKSSKSPKSTSKTSADFCCSEIEKKGKTADELKVAGNSDTIPLHGNGSNGVASTGIMKMMGLRKSTKPTPLASTEGIDVKCKKVTKIKMLFPYDEFVKIFQSDVFGIYPRGLLNCGNSCYANAVLQCLTSTKPLVIYLLYRSHSKACCAKDWCLMCELEQHIMILRENGAPLSPSRILWHMRSINCHMGEGSQEDAHEFLRLLIASMQSICLEGLGGEKKVDPRIQETTFIQHTFGGRLQSKVKCLNCNHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCTSYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFMTGTGDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDAEVQPVLINQVMSEGAYILFYMRSCPRPPVEHTMNAMQQSVYDSSKHNPMEMQKPNKPGHSRHGSRQFFVPEPSPNTRPEITTHIIDTTNGFLRKSTNRNALPVTQTYAENVRREFSDATSSDWSLFTSSDEASFTTESTRDSFSTVDYGDSCNMDPISSIFNYPPEKSYLKFSHSRPVTRVFPEKGHVKQVQRIDHSKRVSHSSSNEHPPNGNCGMYVYYGSNPVCGTTQTSSQCEF 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02373 989 MobiDBLite consensus disorder prediction 798 830 - -
Gma15g02373 989 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 470 485 IPR018200 GO:0004843|GO:0006511
Gma15g02373 989 MobiDBLite consensus disorder prediction 942 961 - -
Gma15g02373 989 ProSiteProfiles Zinc finger MYND-type profile. 76 113 IPR002893 -
Gma15g02373 989 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 20 936 - -
Gma15g02373 989 Pfam Ubiquitin carboxyl-terminal hydrolase 470 772 IPR001394 GO:0004843|GO:0016579
Gma15g02373 989 Pfam MYND finger 76 113 IPR002893 -
Gma15g02373 989 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20 936 - -
Gma15g02373 989 SUPERFAMILY HIT/MYND zinc finger-like 71 117 - -
Gma15g02373 989 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 469 775 IPR028889 -
Gma15g02373 989 Gene3D Cysteine proteinases 466 783 - -
Gma15g02373 989 Gene3D - 65 117 - -
Gma15g02373 989 MobiDBLite consensus disorder prediction 353 372 - -
Gma15g02373 989 CDD Peptidase_C19E 468 773 - -
Gma15g02373 989 SUPERFAMILY Cysteine proteinases 466 775 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02373 Gma-Chr15 50346588 50355691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02373 447 782 Miscellaneous Gene Families AT4G31670 53.353 4.27e-125 392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02373 15 50346588 50355691 Gma15g02373 15 50346588 50355691 ECH