Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02283 ATGTCTATACAACATGAAAATTCTGAGACAAAAAACGTAATATGTCCACAAAAAAGACTAGAAAATCTTATGCATCATGCTGGAAACAAGTTCTGCGCTGATTGTGGAACAACAGAGCCAAGATGGGTGTCTTCAAGTTTTGGAGTATTTATTTGCATCAAGTGTTCTGGCATACATAGAAGTCTAGGAGTCCACATATCAAAGGTTCTATCACTGAAGCTAGATGAATGGACGGACGAACAAGTTGATGCATTAGCAAAGTTGGGTGGAAATACATTATTAAATAAGAAGTACGAAGCTTGCCTCCCAAGTAACATAAGAAAACCAAAACCACATTCATCCATTGAGGAGCGCTCTGAATTTATTCGGAGAAAATATGAGATGCAACAATTTATCGGGTATGATGACGGTTTATCATGCCCCATTGTCCCATCTCAAGGAAGAAGCATATCACTTGCTCTTGCTCAAAGTAGCACTTCATACTACAATTCTTTTATGGACAACAAACCATCTGAAAAACACCAAAGCAAACATCGTATTGGAAACACATTCCGAAACAGCTGGGGAAGAAAAGATTCTGAGCACAAGTCTGCAAAGAAAAGTACCTCTTTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTGGTTAAAGGCACTCACCTAGCCATTCGAGATGTAATGACTAGTGACCCTTATGTCATCCTTTCTTTGGGTCACCAATCAGTAAAAACACGTGTCATAAAGAGCAATTTGAATCCGGTCTGGAATGAAAGCCTAATGCTATCAATTCCAGAGAACATTCCTCCTCTAAAAGTGCTTGTGTATGACAAAGATACATTTTCAACTGATGATTTTATGGGGGAGGCTGAAATAGACATTCAACCTCTAGTTATTGCCGCAAAGGCCTACGAGAAATTGAATATCAATGAGTCCATGCAGCTTGGAAAATTTGTAGCAAGCAAGGACAACACCCTTGTTAGGGATGGTATCATATCTCTTGATGAAGGGAAGATCAAACAGGAAATCTCATTGAGGCTACAGAATATTGAGAGGGGTGAGCTGGAGCTTGAGCTTGAGTGTGTTCCCCTTACTCAATAG 1107 0.3957 MSIQHENSETKNVICPQKRLENLMHHAGNKFCADCGTTEPRWVSSSFGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALAKLGGNTLLNKKYEACLPSNIRKPKPHSSIEERSEFIRRKYEMQQFIGYDDGLSCPIVPSQGRSISLALAQSSTSYYNSFMDNKPSEKHQSKHRIGNTFRNSWGRKDSEHKSAKKSTSLAGMVEFVGLIKVNVVKGTHLAIRDVMTSDPYVILSLGHQSVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVIAAKAYEKLNINESMQLGKFVASKDNTLVRDGIISLDEGKIKQEISLRLQNIERGELELELECVPLTQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02283 368 Gene3D C2 domain 211 368 IPR035892 -
Gma15g02283 368 ProSiteProfiles C2 domain profile. 190 309 IPR000008 -
Gma15g02283 368 CDD ArfGap 20 126 - -
Gma15g02283 368 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 13 368 - -
Gma15g02283 368 MobiDBLite consensus disorder prediction 168 199 - -
Gma15g02283 368 Gene3D Arf GTPase activating protein 2 137 IPR038508 -
Gma15g02283 368 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 209 306 IPR035892 -
Gma15g02283 368 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Gma15g02283 368 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Gma15g02283 368 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Gma15g02283 368 SUPERFAMILY ArfGap/RecO-like zinc finger 17 132 IPR037278 -
Gma15g02283 368 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 13 368 IPR044518 GO:0005096|GO:0005543
Gma15g02283 368 SMART arf_gap_3 17 138 IPR001164 GO:0005096
Gma15g02283 368 SMART C2_3c 213 308 IPR000008 -
Gma15g02283 368 CDD C2_ArfGAP 211 355 - -
Gma15g02283 368 Pfam C2 domain 213 300 IPR000008 -
Gma15g02283 368 Pfam Putative GTPase activating protein for Arf 18 132 IPR001164 GO:0005096
Gma15g02283 368 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 132 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02283 Gma-Chr15 47828860 47840770 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01738 13 32592184 32598042 Gma15g02283 15 47828860 47840770 GST
Gma15g02283 15 47828860 47840770 Gma13g01738 13 32592184 32598042 PCT
Gma15g02283 15 47828860 47840770 Gma15g02283 15 47828860 47840770 PCT
Gma13g01738 13 32592184 32598042 Gma15g02283 15 47828860 47840770 PCT