Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02279 ATGATGTACAATGATcagcagcatcagcaccagcagcaccagtaccagcaacaacagcagcagcagcagcagcCTTTCCACCAGCCGCCGGGTCCGGAGTTCCACCGCGGACCGCCGCCGCCGTCGCATCCGCCGCCGATGATGCGGCAAGGCTCCGCCTCGTCGACGAACCTCGCCCCCGAGTTTCACCATCCCGGCCCCGGAGGGCCCCCGCCTCCTCATTACGATGCTCACAGTGATAGCCATGGTGCAAAAAGAATACGAAAGCTTACTCAAAGGAAAGCAGTTGATTATACAAGCACAGTTGTGCGTTATATGCAGATTCGTATGTCGCAGCGGGATTCAAGGGATAGGACTGTACTGCAACCCACCCCGGCAGCAGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAATCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCCATTAATCGCGTTCTTTGGACTCCAACAGGCCGGCGACTTATTACTGGTTCACAGACTGGGGAATTTACTCTTTGGAATGGACAATCTTTTAATTTTGAAATGATTCTTCAGGCGCATGATCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAATTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGATTTAAGTTTCTGTAGGACAGATTTGAAGTTCTGTTCATGCTCTGATGATACCACAGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTGTTCATTATCTGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCTCTATTAGTATCAGGTGGGAAGGACAATCTAGTGAAACTTTGGGATGCTAAAACAGGGAGAGAGCTTTGTTCATTTCATGGCCACAAAAACACTGTGCTGTGTGTAAAATGGAATCAAAATGGCAACTGGGTGTTAACGGCTTCAAAGGATCAAATAATAAAGCTTTATGACATAAGAGCAATGAAGGAACTTGAATCGTTCCGTGGGCATCGCAAGGATGTTACTACTTTGGCATGGCATCCGTTCCATGAAGAGTACTTTGTCAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTTGGGCATGAAACTCCACAAATTGAAATTTCCAATGCTCATGATAATAATGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTGTGCAGTGGCAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACCCTGCCCGTGATAGATTTAACACTGGCATGCCAGGATATGCTGACCAAAATCCTGTTGTTGGTCGGATGGGTGGTAATTTTACAATAGCTGAAGGCCCAACAACTCCAGGACCATTTGCCCCTGGGTTGACTCGAAATGAGGGTACCATTCCAGGTGTTGGAGTTGCAATGCCCTTATCTATTCCTTCTCTTGACATGCCTCAAGGGGAGCAGAAGCAACCCCATCCTGTTTCAATGGGTGCTCCTCCTCTTCCCCCCGGTCCACATCCCTCCCTTCTTAATGCCAACCAACAGCAACCATACCAACAGAATCCTCAGCAGATCCCACAACATCAACACCAGGCTCTACCACAACAGATGGGTCCTTTGCCTATGCCTCCAAATATGCAACAACTACAGCACCCTTCCCATTCTCCCTTCCCTAATATGCCTCGCCCTCCACCCCAAATGCCTATTGGCATGCCAGGATCTATACCAGGGATTTCATCAGTGCCTACATCACATCCAATGCCAATGCCAGGTCCAATGGGAATGCAAGGGGCGATGAATCAGATGGGTACTCCAATGCCACAAGGTCCTTATGTAGGCATGAATCAAATGCATTCAGGATCCTTGCCTACAAGTGGAGGGCCACCTCTTGGTGGTTTTCCAGGCAACTTGCCAAATATGCAAGGGCCATCAAATGCCAATTATCCTCAAGGTGCTTCATTTAACAGACCTCAAGGTGGCCAAATGCCTCTGATGCAAGGGTATAGTCCTTACCAGTCTGGTAATCAATCTGGGATGCCTCCAAACGCACAACCATAG 2145 0.4597 MMYNDQQHQHQQHQYQQQQQQQQQPFHQPPGPEFHRGPPPPSHPPPMMRQGSASSTNLAPEFHHPGPGGPPPPHYDAHSDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMSQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLSGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDPARDRFNTGMPGYADQNPVVGRMGGNFTIAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLLNANQQQPYQQNPQQIPQHQHQALPQQMGPLPMPPNMQQLQHPSHSPFPNMPRPPPQMPIGMPGSIPGISSVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYSPYQSGNQSGMPPNAQP 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 322 356 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 196 228 - -
Gma15g02279 714 SMART WD40_4 273 312 IPR001680 GO:0005515
Gma15g02279 714 SMART WD40_4 231 270 IPR001680 GO:0005515
Gma15g02279 714 SMART WD40_4 189 228 IPR001680 GO:0005515
Gma15g02279 714 SMART WD40_4 357 397 IPR001680 GO:0005515
Gma15g02279 714 SMART WD40_4 142 186 IPR001680 GO:0005515
Gma15g02279 714 SMART WD40_4 315 354 IPR001680 GO:0005515
Gma15g02279 714 SMART WD40_4 400 440 IPR001680 GO:0005515
Gma15g02279 714 MobiDBLite consensus disorder prediction 504 590 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 408 439 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 228 IPR001680 GO:0005515
Gma15g02279 714 MobiDBLite consensus disorder prediction 31 47 - -
Gma15g02279 714 MobiDBLite consensus disorder prediction 1 28 - -
Gma15g02279 714 CDD WD40 158 439 - -
Gma15g02279 714 Pfam WD domain, G-beta repeat 278 312 IPR001680 GO:0005515
Gma15g02279 714 Pfam WD domain, G-beta repeat 239 270 IPR001680 GO:0005515
Gma15g02279 714 Pfam WD domain, G-beta repeat 194 227 IPR001680 GO:0005515
Gma15g02279 714 Pfam WD domain, G-beta repeat 317 354 IPR001680 GO:0005515
Gma15g02279 714 Pfam WD domain, G-beta repeat 410 439 IPR001680 GO:0005515
Gma15g02279 714 Pfam WD domain, G-beta repeat 360 396 IPR001680 GO:0005515
Gma15g02279 714 Gene3D - 135 312 IPR015943 GO:0005515
Gma15g02279 714 MobiDBLite consensus disorder prediction 537 563 - -
Gma15g02279 714 Gene3D - 313 450 IPR015943 GO:0005515
Gma15g02279 714 PRINTS G protein beta WD-40 repeat signature 257 271 IPR020472 -
Gma15g02279 714 PRINTS G protein beta WD-40 repeat signature 299 313 IPR020472 -
Gma15g02279 714 PRINTS G protein beta WD-40 repeat signature 427 441 IPR020472 -
Gma15g02279 714 MobiDBLite consensus disorder prediction 78 93 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 154 186 IPR001680 GO:0005515
Gma15g02279 714 ProSitePatterns Trp-Asp (WD) repeats signature. 299 313 IPR019775 -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 280 321 IPR001680 GO:0005515
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 322 363 IPR001680 GO:0005515
Gma15g02279 714 MobiDBLite consensus disorder prediction 649 714 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 364 396 IPR001680 GO:0005515
Gma15g02279 714 MobiDBLite consensus disorder prediction 667 714 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 280 317 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 238 270 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 238 270 IPR001680 GO:0005515
Gma15g02279 714 PANTHER WD40 REPEAT PROTEIN 70 710 IPR045245 GO:0031124
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 364 396 - -
Gma15g02279 714 MobiDBLite consensus disorder prediction 1 93 - -
Gma15g02279 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 408 439 IPR001680 GO:0005515
Gma15g02279 714 SUPERFAMILY WD40 repeat-like 150 439 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02279 Gma-Chr15 47748558 47769230 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01734 13 32549899 32563008 Gma15g02279 15 47748558 47769230 GST