Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02277 ATGAGGCACTCTACGATTTTCATATTTGTCTCACGTTTCATCAGTAAGCACACAACAAAGTTTTGCTGCGGAAACAGTCAGGAGACACTGCTCGTGACAGATTTAATGCTGACATGCAAGGACATGCTGAGCAAAATACTGTTGCTGGTATTGTTAAACAGGGTTATCAAAGAATGTGAAAAGCAACACATGAGCAAGAAAAACAAATTGAAGAAAACCAAGCATAGCACCAAAGGTCACTGGGGCAATCTGTTGAAGGTGAAGAATGCCTCTGCTCTCACTTCCTCTACCATTCACAAGGTTCTATTACAGCTCTCACTCTATGGTTATGGGCTCTCTCATTCCTTCCCATTCTTCAAATGGCTTGACTCCATCCCACATTATAGCCATTCCTTGCAATGTTCATGGGCCACGATTCACATCCTCACCAAACATAAGCATTTCAAAACTGCACAACATGTGCTTGAAAAAATTGCCCACAAGGATTTTCTTTCATCTCCTTCAGTTTTGAGCACTTTGGTGAGGACTCATGACAACCAGGAAGTTAATTCTCAAGTTTTGAGCTGGCTTGTCATACATTATGCCAAGTCAAAGATGACACAGGATGCAATTCAAGTTTTTGAGCAGATGAGGTTACATGAAGTCAAACCTCATTTGCATGCTTGTACTGTTCTTTTGAATTCCTTGTTGAAGGATGGGGTTACTCACATGGTGTGGAAAATTTACAAGAGGATGGTTCAAGTTGGGGTTGTTCCCAATATTTACATTTACAATTGTTTATTCCATGCTTGTTCAAAATCAGGAGATGTGGAAAGGGCAGAACAGTTATTAAATGAGATGGATGTTAAGGGTGTGCTTCAGGATATCTTCACATACAATACTTTGTTATCGTTGTATTGCAAGAAAGGTATGCACTATGAGGCTTTATCCATCCAGAACAGAATGGAAAGAGAGGGGATAAACCTTGATATTGTTAGTTATAACTCTCTTATTTATGGATTTTGTAAAGAAGGCAGGATGAGAGAAGCTATGAGGATGTTTAGTGAAATAAAAAATGCAACTCCCAATCATGTGACATATACTACATTGATTGATGGTTATTGTAAAACAAACGAACTGGAAGAAGCTCTGAAAATGTGCAAACTGATGGAGGCTAAGGGATTGTACCCTGGAGTTGTTACTTATAATTCAATTCTGCGCAAGCTGTGTCGAGATGGCAGGATAAGGGATGCAAACAAACTGTTGAATGAAATGAGTGAAAGGAAACTTCAAGCTGACAATATCACATGCAACACACTAATTAATGCTTACTGCAAGATTGGAGATTTGAAGTCAGCTTTGAAATTTAAGAACAAGATGTTAGAAGCTGGTCTAAAACCTGATCCATTTACATATAAGGCACTGATTCATGGGTTCTGCAAGACAAATGAGCTGGAAAGTGCAACGGAGTTAATGTTCAGCATGCTTGATGCTGGATTTACCCCCAGTTATTGTACGTATTCATGGATTGTAGATGGCTACAATAAGAAAGACAATATGGATGCAGTTTTAGCCCTTCCAGACGAGTTTCTGAGTAGAGGAATTTGTCTTGATGTTTCAGTATACAGGGCATTGATAAGAAGGTCATGCAAGGTAGAAAGGATTCAATGTGCTGAAAGGTTATTCTATCATATGGAAGGAAAGGGTATATCAGGTGAAAGTGTTATCTACACCAGTATTGCATATGCTTATTGGAATGTGGGGAATGTAAGTGCTGCCTCAAGTATGCTAGAAGAGATGGCTAGGAGAAGGTTGATGATAACAGTCAAACTTTATAGATGCTTTAGCACATCTGATGCTAATGAAAACAAAGTGTCACAGATCTTCTGGAATCATGTGATGGATAGGGGTCTGATGTCGAGAAATACAATGAATAAAATACAGCAGAAGCTGATATGA 1938 0.3896 MRHSTIFIFVSRFISKHTTKFCCGNSQETLLVTDLMLTCKDMLSKILLLVLLNRVIKECEKQHMSKKNKLKKTKHSTKGHWGNLLKVKNASALTSSTIHKVLLQLSLYGYGLSHSFPFFKWLDSIPHYSHSLQCSWATIHILTKHKHFKTAQHVLEKIAHKDFLSSPSVLSTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCRDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESATELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRRSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRLMITVKLYRCFSTSDANENKVSQIFWNHVMDRGLMSRNTMNKIQQKLI 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 426 460 IPR002885 -
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 252 IPR002885 -
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 356 390 IPR002885 -
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 391 425 IPR002885 -
Gma15g02277 645 PANTHER ATPASE EXPRESSION PROTEIN 3 77 641 - -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 221 254 IPR002885 -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 290 323 IPR002885 -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 325 351 IPR002885 -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 255 286 IPR002885 -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 463 496 IPR002885 -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 393 426 IPR002885 -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 428 461 IPR002885 -
Gma15g02277 645 TIGRFAM PPR: pentatricopeptide repeat domain 358 391 IPR002885 -
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 353 IPR002885 -
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 461 495 IPR002885 -
Gma15g02277 645 Pfam Pentacotripeptide-repeat region of PRORP 184 338 IPR033443 -
Gma15g02277 645 Gene3D Tetratricopeptide repeat domain 523 598 IPR011990 GO:0005515
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 217 IPR002885 -
Gma15g02277 645 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 77 641 - -
Gma15g02277 645 Gene3D Tetratricopeptide repeat domain 135 303 IPR011990 GO:0005515
Gma15g02277 645 Gene3D Tetratricopeptide repeat domain 304 408 IPR011990 GO:0005515
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 253 287 IPR002885 -
Gma15g02277 645 Pfam PPR repeat 568 597 IPR002885 -
Gma15g02277 645 Pfam PPR repeat 534 563 IPR002885 -
Gma15g02277 645 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 322 IPR002885 -
Gma15g02277 645 Pfam PPR repeat family 355 403 IPR002885 -
Gma15g02277 645 Pfam PPR repeat family 426 474 IPR002885 -
Gma15g02277 645 Gene3D Tetratricopeptide repeat domain 409 522 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02277 Gma-Chr15 47677707 47684700 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01732 13 32530984 32535206 Gma15g02277 15 47677707 47684700 GST