Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02276 ATGGCTATGACTGTAGAGGCTCAGTTCCATGTTTTGGCTGTTGATGACAGTATTATTGACCGAATGCTGATTGAGAGGCTCCTAAAAACCTCTTCCTTTCATGTTACTACAGTGGACTCTGCCACTAAGGCCTTAAAATTTCTTGGTTTGGTTGAAGATGAGTTGAGGACTTTTGACACCACTGTTGCATCAGAAATTCATCAGGATGTAGATATAAACCTGATTATAACAGATTACTGCATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAAACATACCAGTTGTGATTATGTCCTCAGAGAATGTACCATCAAGGATCAACAGATGCTTGGAAGAGGGAGCAGAAGAGTTCTTTCTGAAACCAGTTCAACAGGCAGATGTGAACAAGCTGAAGCCACATTTGATGAAATCAAGAGCAAAGGAAGAGCAAGACCAACCCTTCAATAACAAAAGGAAGGACATGGAAGAAATCCATTCCCCAAATAAAACCAGAATAAAATGTAGCAGTTAA 540 0.3963 MAMTVEAQFHVLAVDDSIIDRMLIERLLKTSSFHVTTVDSATKALKFLGLVEDELRTFDTTVASEIHQDVDINLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPHLMKSRAKEEQDQPFNNKRKDMEEIHSPNKTRIKCSS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02276 179 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Gma15g02276 179 SMART REC_2 9 144 IPR001789 GO:0000160
Gma15g02276 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 176 IPR045279 GO:0009736
Gma15g02276 179 MobiDBLite consensus disorder prediction 145 179 - -
Gma15g02276 179 CDD REC_typeA_ARR 11 140 - -
Gma15g02276 179 MobiDBLite consensus disorder prediction 145 172 - -
Gma15g02276 179 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 176 - -
Gma15g02276 179 SUPERFAMILY CheY-like 9 145 IPR011006 -
Gma15g02276 179 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160
Gma15g02276 179 Gene3D - 10 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02276 Gma-Chr15 47669633 47671820 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma15g02276 Response_reg 4.1e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02276 15 47669633 47671820 Gma11g01728 11 19192219 19197086 GST
Gma13g01731 13 32525140 32526824 Gma15g02276 15 47669633 47671820 GST
Gma15g02276 15 47669633 47671820 Gma15g02616 15 54490559 54495189 PCT