Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02274 ATGACCTCTATTTATAGTGTTAAATGGATTTTCCGTGAAGTGGATTCGGCCACTAAGAAGAAGTGCGGAGTAAACGCGGAAGATTGTTTGTCAAACGACGACAGTTTTGGCGCCGACGGGAATGGACGGCACGCCGTTTTCAATGCGCTGGATACTCTGCTTAAGGACAGTTTAGAGCGTCTTAAGATGATGAGCGAGAACCTATGTTTGGTAAAGACAGGTCTAACTATAGGATATGCATGTGAATCCAAGTATGCTGAAGATACAGCTACTATTAGGCGTTTGTGCTTAGATGGTAAGTTGGAAGCAGCTGTTTGGCTTCAGGGGAAAATGGTGCAGAAAGGTGTTGTTCCTGATGTGTTTACCCACAGCCATATTGTAAATGGGCTTTGCAAAATTGGTCTTCCGGACAAGGCGGATTTGGTTGTTCGAGAGATGCTAGAATTTGGTCCTTGTCCCAACTGTGCCACTTATAACACTTTAATTAAGGGCTATTGCGCTGTTAATGGCGTGGATAGGGCTTTGTATCTGTTCTCCACCATGGCCTATGCTGGGATTCTGCCAAACAGGGTTACTTGTAGCATACTGGTGTGTGCACTGTGTGAGAAAGGTCTTCTGATGGAAGCTAAAAGCATGCTTGTAGAAATATTAAAGGATGACGACGAGAAAGGTATACCTGATTTAGTTACCTCTTCTATATTTATGGATAGCTACTTTAAGAATGGAGCAATTATTCAGGCTCTCAATCTTTGGAATCAGATGCTTCAAAATTGTACAAAAGTTGATGTTGTAGCTTATAATGTTCTTATCAATGGATTTTGCAAGAGTCAACTAATGAACCTTGCATATGGATATGCATGTGAGATGTTTAAGAAAGGTGCTGCTTGTAATATAGGACGGCCTGATTTTGCTCTTCAATTACATAATGAGATGGTGCAGAGGGGGTATGAACCAGATTTAATAACTTATACTGAACTTGTTAGGGGGTTCTGTATTAGAGGTAAGATGAAAGAGGCAGAAGAGCTCTATGCCAAAATACTAAAATCTGGTTTGTTGAATGATCATGTTCCAGATGCAGATAAAGTGCAAGAAGCAGTGCAAGTAGATACTGCTTTGGAGAAAGTTTTGGACAAAGTAGGAGCTGATCCTAACTCCAAATCTGGGTACACTAGAGCAGGCCATTTGGAGCAATTGGAAGAAGTGCTGCTTCTCTTGGTGGAGGTTATCATAAATGTCCATAAGTGTACCATTGCCAGGCTACCTGCACAAATTGGGCCGAGTGTGCCTAACAGAGAACCTTGGGAATCATACGCACTGCCTCACTGGTTCATAATGTTGAATGATTCAAATTGTAACTTTAGGAATCTGGTTGATTTTTTGCCCGTTTTGTATTTTGTTTTCAGTAGTCATGAAAAACTTGAATTGTTTACTCAAAGTGCCTTCCACAAACTTAGTTGA 1458 0.4108 MTSIYSVKWIFREVDSATKKKCGVNAEDCLSNDDSFGADGNGRHAVFNALDTLLKDSLERLKMMSENLCLVKTGLTIGYACESKYAEDTATIRRLCLDGKLEAAVWLQGKMVQKGVVPDVFTHSHIVNGLCKIGLPDKADLVVREMLEFGPCPNCATYNTLIKGYCAVNGVDRALYLFSTMAYAGILPNRVTCSILVCALCEKGLLMEAKSMLVEILKDDDEKGIPDLVTSSIFMDSYFKNGAIIQALNLWNQMLQNCTKVDVVAYNVLINGFCKSQLMNLAYGYACEMFKKGAACNIGRPDFALQLHNEMVQRGYEPDLITYTELVRGFCIRGKMKEAEELYAKILKSGLLNDHVPDADKVQEAVQVDTALEKVLDKVGADPNSKSGYTRAGHLEQLEEVLLLLVEVIINVHKCTIARLPAQIGPSVPNREPWESYALPHWFIMLNDSNCNFRNLVDFLPVLYFVFSSHEKLELFTQSAFHKLS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02274 485 Pfam PPR repeat family 226 275 IPR002885 -
Gma15g02274 485 Pfam PPR repeat family 153 201 IPR002885 -
Gma15g02274 485 TIGRFAM PPR: pentatricopeptide repeat domain 121 155 IPR002885 -
Gma15g02274 485 TIGRFAM PPR: pentatricopeptide repeat domain 157 189 IPR002885 -
Gma15g02274 485 TIGRFAM PPR: pentatricopeptide repeat domain 264 295 IPR002885 -
Gma15g02274 485 TIGRFAM PPR: pentatricopeptide repeat domain 321 351 IPR002885 -
Gma15g02274 485 TIGRFAM PPR: pentatricopeptide repeat domain 295 319 IPR002885 -
Gma15g02274 485 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 9 293 - -
Gma15g02274 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 154 188 IPR002885 -
Gma15g02274 485 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 293 357 - -
Gma15g02274 485 Pfam PPR repeat 114 146 IPR002885 -
Gma15g02274 485 Pfam PPR repeat 314 342 IPR002885 -
Gma15g02274 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 119 153 IPR002885 -
Gma15g02274 485 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 9 293 - -
Gma15g02274 485 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 293 357 - -
Gma15g02274 485 Gene3D Tetratricopeptide repeat domain 71 218 IPR011990 GO:0005515
Gma15g02274 485 Gene3D Tetratricopeptide repeat domain 219 295 IPR011990 GO:0005515
Gma15g02274 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 319 353 IPR002885 -
Gma15g02274 485 Gene3D Tetratricopeptide repeat domain 296 423 IPR011990 GO:0005515
Gma15g02274 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 262 296 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02274 Gma-Chr15 47597900 47605488 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01729 13 32477422 32484751 Gma15g02274 15 47597900 47605488 GST