Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02273 ATGGCTACACGCCAGGAAATTTGTACAGCATCCATTAGTGACTCTTCAATTAGTCATGCTAGTCAGCTGTCAAATCCATTCCTTGGGCTGCCCCTTGAGTTTGGCAGATGTGAATCTTGTGGTACTTCTGAAGTTGGAAAATGCGAAGGTCACTTCGGATATATTGAGTTGCCAATTCCAATATATCACCCAAGTCATATCAGTGACTTGAAACGGATGCTGAGCATGGTCTGCTTAAACTGCCTAAAATTAAGGAAAACCAAGCTTCCAGCTTCAAGCAGTGGTTTAGCCCAGAGATTAATATCTCCTTGTTGTCAGGAGGATAAGGCTGCTCTAGTTTCTATTCGGGAAGTTAAAACAAGTGATGGGGCTTGTTATCTGGCGTTGAAAGTATCCAAATCCAAGATGCAAAATGGTTTTTGGAGTTTCTTAGAAAAATATGGTTATCGCTATGGGGGTGATCACACTCGAGCCTTGCTTCCTTGTGAGGCAATGGAAATTATTAAGAGAATTCCGATAGAGACAAAAAAAAAGCTTGCTGGAAAAGGATATTTTCCTCAAGATGGATATGTTTTGAAGTATCTTCCGGTGCCACCAAATTGCTTGTCTGTGCCAGAAGTTTCAGACGGTGTCAGTGTCATGTCGTCGGATCCTTCCATAACAATTCTCAGAAAATTGCTCAGGAAGGTTGAAATCATAAAAAGCTCTAGATCTGGTGAACCAAATTTCGAGTCTCATCACGTAGAAGCAAATGATTTGCAGTCTGTGGTTGATCAATATTTTCAAATTAGAGGAACTTCTAAGCCAGCACGTGATATAGAGACACATTTTGGGGTCAATAAAGAGCTTACTGCATCCTCAACAAAAGCATGGCTTGAGAAAATGAGGACATTATTTATAAGAAAGGGTTCAGGTTTTTCTTCCCGGAATGTAATTACTGGAGATTGTTATAAGAGGATAAATGAAGTAGGAATTCCGGTTGAAGTTGCCCAACGGATAACGTTTGAGGAGAGAGTTAACATCCACAACATCAGATATTTACAGAAGTTGGTTGATGAACATTTGTGCCTGACCTACAAGGAAGGTGGGTCAACTTATTCACTCAGGGAGGGCTCAAAGGGGCACATATATCTCAAGCCTGGTCAGATAGTGCATCGGAGGATTATGGATGGGGATATTGTCTTCATCAACAGACCACCTACAACACACAAGCACTCCTTACAAGCCCTTTATGTTTACATCCATGAAGACCACACTGTGAAGATAAATCCTTTAATTTGTGGACCACTTGGGGCTGATTTTGATGGTGACTGTGTCCATCTGTTTTATCCGCAATCACTTGCTGCTAAAGCTGAAGTTGTGGAGCTATTTTCTGTGGAGAATCAACTGCTCAGCTCTCACAGTGGTAATTTGAACCTACAGTTATCCACAGACTCGTTGTTGTCACTGAAGATGTTGGTCAAGAGATGTTTTTTTGATAGAGCAGCAGCTAATCAATTGGCGATGTTTATTTTGCTTCCTTTGCCTCGGCCTGCTTTGCTCAAGGCCAGTTCTGGTGATGCTTGTTGGACTTCCATCCAAATTTTACAGTGTGCTTTACCTTTGGGTTTTGATTGCACTGGGGGACGGTATTTGATTAGGCAGAGTGAGATCTTAGAATTTGAATTCAGCAGGGATGTTCTGCCTGCAACCGTAAATGAAATAGCAGCTTCAATTTTCTTTGGCAAGGGTCCCAAGGAGGCACTTAATTTCTTTGATGTATTGCAACCCTTTTTGATGGAAAGCTTATTTGCGGAAGGGTTTAGTGTTAGCCTGGAAGAGTTTTCAATATCCAGGGCAATTAAAAGGATAATAAGAAAAAGCATTGGAAAAGTTTCTTCTCTGCTGTATCAGCTGAGGTCCTTGTACAATGAGCTGGTGGCGCAGCAACTGGAGAAGCACATTCGAGATGTTGAACTTCCTATCATTAATTTTGCTCTAAAGTCAACTAAATTAGGAGATTTAATTGATTCAAAGAGTAAATCTGCTATTGATAAGGTTGTTCAGCAGATTGGGTTTTTAGGGCAGCAACTTTTTGATAGGGGAAGATTCTACTCAAAGGGATTGGTAGATGATGTGGCATCACATTTTCATGCAAAGTGTTGTTATGACGGGGATGGTTATCCCTCTGCTGAGTATGGACTGCTCAAAGGGTGTTTTTTTAATGGTTTGGATCCATACGAAGAGATGGTGCATTCGATTTCAACAAGGGAAATAATGGTGCGTTCTTCGAGAGGATTATCTGAACCAGGAACACTCTTTAAGAATTTGATGGCCATCCTTCGGGATGTTGTTATCTGTTATGATGGAACTGTCAGAAACATTTGTAGTAATTCCATCATCCAGTTTGAATACGGGATACAAGCTGGAGACAAAAGTGAGCACTTATTCCCTGCTGGTGAGCCTGTAGGTGTGTTGGCTGCAACTGCTATGTCAAATCCTGCTTACAAGGCTGTCCTTGATGCTAGTCCTAGTAGCAACTCTTCATGGGAGTTGATGAAGGAAATATTACTCTGCAAGGTTAATTTTAGGAATGAACTTGTTGATCGGCGTGTCATTTTGTACTTGAATGACTGTGATTGTGGAGGGAGTTATTGCCGAGAAAATGCAGCATATTCAGTTAAAGATCAATTGAGAAAAGTCAGTCTCAAGGATGCAGCTGTGGAGTTCATTATTGAATACCAACAACAGCGAACTCAAAAGGAAAATTCTGAAACTGATGTTGGACTTGTTGGTCATATTTATTTGGATGAGATGATGTTAGAGGAGCTGAAGATCAGCATGGCCTATGTTTTCGACAAATGCCATGAAAGACTCAAGTCTTTTAGTCAGAAAAAGAAAGTTAATCAATCTTTGAAGAACATTGAATTATCATTTAGTGAGTCTTGCTCATCTTCACATCCTGCTGCACCATGTTTAACATTTTGGCTAAAGAATTATGATAGTGATTTGGATAATGCTGTAAAGGTCCTGGCTGAAAAGATCTGCCCTGTTCTGTTTAAAACAATAATCCAAGGAGACCCGCGCATTAGCTCTGCGAGTATAATCTGGGTTAGTCCAGATACAAACACATGGGTCCGAAACCCTTATAAATCTTCTAATGGTGAATTGGCACTTGACATCATTCTCGAGAAGGAAGCTGTCAAGCAGAGTGGCGATGCTTGGAGAGTTGTACTTGATGCCTGCCTTCCTGTTCTTCACTTGATTGATACCAGGCGTTCCATCCCTTACGCTATTAAGCAGATTCAGGAATTACTGGGGATATCATGTACTTTTGATCAAGCGATTCAGCGTGTTGCAGCATCTGTGAAAATGGTGGCGAAAGGTGTACTTAGGGAGCATCTAATTCTGTTAGCTAGTAGTATGACTTGTGGTGGGAACTTGGTTGGCTTTAATATAGGTGGATATAAAGCTCTGTCTCGTCAATTAAATATACAAGTACCATTCACAGATGCAACACTCTTTACACCTAAAAAGTGTTTTGAGAGAGCTGCTGAGAAATGCCATACTGATTCTCTGTCAAGCATAGTTGCCTCCTGTTCCTGGGGTAAACATGTGGCAGTTGGTACAGGATCAAAATTTGATGTTGTTTGGGATGCAAATGAGATAAAATCAAATGAAATTGAAGGGATGGATGTTTACAGTTTTCTTCACATGGTGAAAAGCTTTACCAATGGCGAAGAAGAAACCGATGCTTGTTTGGGTGAAGATATTGATGATTTGCTGGAAGAAGAATATATGGACTTGGGCATGTCCCCACAACATAACTCTGGTTTTGAAGCTGTCTTTGAAGAGAATCCTGAAGTACTGAATGGTTCAACATCCAATGGTTGGGATGTAAGTTCAAATCAGGGTGAATCAAAAACCAATGAGTGGTCAggttgggcaagtagtaacaaagctgaaataaaagatggtagatctgaaattgcccccaagaattcttgggggaaaactgtcaaccaagaagactcttccaagtctaacccttggagtacaagcaccatagcagatcagacaaaaactaaatctaatgaatggtctgcctggggaagtaacaagtctgaaataccagttggttgggcaagtagtaacaaaactgaaataaaagatggtagatctgaaactgcccaagagaattcttgggggaaaactgtcaaccaagaagactcttccaagtctaatgcttggaatacaagcaccacagtagatcatgcaaacactaaatctaatgaatggtctgcctggggaagtaaccagtctgaaataccagctggtGGATCTAAAGCAGTTCAAGAAGATTCTTGGGGCTCAAGTAAGTGGAAGGCTgatgttgcccaagaagacaattccaggcttggtgcttgggatgcaaatgcagcagatcagacaaaatctagtgaatggtcgggttggggaaagaagaaagatgttacccaagaagacaattccaggcttggtgcttgggatgcaaatgcagcagatcagacaaaatctagagactggtcgggttggggaaagaagaaagatattacccaagaagacaattccaggcttggtgcttgggatgcaaatgcagcagatcagacaaaatctagtgaatggtcgggttggggaaagaagaaagatgttacccaagaagacaattccaggcttggtgcttgggatgcaaatacagcagatcagacaaaatctaatgaatggtcaggttggggaaagaagaaagaagttacccaagaagacaattccaggcttggtgcttgggatgcaaatgcagcagatcagacaaaatctaatgaatggtcaggttggggaaagaagaaagatgttacccaagaagacaattccaggtttggtgcttgggatgcaaatgcagaagatcagacaaaatctaatgaatggtcaggttggggaaagaagaaagatgttacccaagaagacaattccaggcttggtgcttgggatgcaaatgcagcagatcagacaaaatctaatgaatggtcagactggggaaagaagaaagaagttacccaagaagacaatgtccaAGATTCTTGGGGCTCCGGTAAGAGGAAAGACAAAGTTACCCAAGAAGACAATTCTGGGTCTGGTGGTTGGGGTGCCAACAGAACAGATCTGGCAAAATCCAAATCTAGTGAATGGTCCAGCTGGGGAAAGAACAAGTCTGAAATACCAGCTGGTGGATCTGAAAATGTGCAGAATGACTCATGGGGCTCGGGTAAATTGGAAGATGATACCCAAAAAGAAAATTCTGGGTCTGCATGGGTGAGAAATAAAGCTGAAACAATAGATGGTGGGTCAGAAAAGCCCCAAGAGGATGCTTGGAATTCTGGTAATTGGAAAGCTGAATCAAAAGTCGGCAATGCCTCTTGGGGAAAACCCAAATCCTCAGAAAGTCAAGCATGGGATTCCCATAATCAGTCAAATCAAAATTCAAGTTCACAGGGATGGGAATCACATATTGCTTCAGCTAATTCAGAAAGTGAAAAAGGTTTTCAGTGGGGAAAGCAAGGTAGAGACTCGTTTAAGAAAAATCGATTTGAAGGTTCGCAAGGCCGGGGTTCAAATGCTGGTGACTGGAAAAATAGGAATCGCCCACCTAGAGCACCTGGACAGAGATTGGACATTTATTCATCTGGTGAGCAGGATGTTCTGAAGGATATTGAACCCATTATGCAGTCTATCAGACGAATCATGCAACAACAGGGGTACAATGATGGGGACCCACTGGCTGCTGAAGATCAACTTTTTGTACTGGAGAATGTCTTTGAGCACCACCCAGATAAAGAAACCAAAATGGGCACTGGAATTGATTATGTCATGGTTAACAAACACAGTAGTTTCCAGGAAAGTAGATGCTTTTATGTGGTTTGTAAAGATGGTGAAAGCAAGGACTTTTCCTACCGGAAGTGTTTGGCCAACTATATAAGCAAGAAGTATCCTGACCTTGCTGAATCATTCCTTGGAAAATATTTTCGGAAACCTCGTGCACGGGGGGACcagactgcaacaccagggcgggatgaagcagccactccgggcgagcagacagcaacgccaggccgggatgaagcagcaactccggctgagcagaTCTCAACACCCACCCCTATGGAAACCAATGAGTAG 6189 0.333 MATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSEVGKCEGHFGYIELPIPIYHPSHISDLKRMLSMVCLNCLKLRKTKLPASSSGLAQRLISPCCQEDKAALVSIREVKTSDGACYLALKVSKSKMQNGFWSFLEKYGYRYGGDHTRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSITILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASSTKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEHLCLTYKEGGSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKRCFFDRAAANQLAMFILLPLPRPALLKASSGDACWTSIQILQCALPLGFDCTGGRYLIRQSEILEFEFSRDVLPATVNEIAASIFFGKGPKEALNFFDVLQPFLMESLFAEGFSVSLEEFSISRAIKRIIRKSIGKVSSLLYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAIDKVVQQIGFLGQQLFDRGRFYSKGLVDDVASHFHAKCCYDGDGYPSAEYGLLKGCFFNGLDPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSEHLFPAGEPVGVLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVILYLNDCDCGGSYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHIYLDEMMLEELKISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSESCSSSHPAAPCLTFWLKNYDSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYKSSNGELALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYSFLHMVKSFTNGEEETDACLGEDIDDLLEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSNGWDVSSNQGESKTNEWSGWASSNKAEIKDGRSEIAPKNSWGKTVNQEDSSKSNPWSTSTIADQTKTKSNEWSAWGSNKSEIPVGWASSNKTEIKDGRSETAQENSWGKTVNQEDSSKSNAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTKSSEWSGWGKKKDVTQEDNSRLGAWDANAADQTKSRDWSGWGKKKDITQEDNSRLGAWDANAADQTKSSEWSGWGKKKDVTQEDNSRLGAWDANTADQTKSNEWSGWGKKKEVTQEDNSRLGAWDANAADQTKSNEWSGWGKKKDVTQEDNSRFGAWDANAEDQTKSNEWSGWGKKKDVTQEDNSRLGAWDANAADQTKSNEWSDWGKKKEVTQEDNVQDSWGSGKRKDKVTQEDNSGSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKLEDDTQKENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAESKVGNASWGKPKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQTATPGRDEAATPGEQTATPGRDEAATPAEQISTPTPMETNE 2062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1581 1595 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1746 1760 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1514 1529 - -
Gma15g02273 2062 Gene3D RNA polymerase II, clamp domain 5 100 IPR044893 -
Gma15g02273 2062 PANTHER DNA-DIRECTED RNA POLYMERASE 177 1364 IPR045867 GO:0003899|GO:0006351
Gma15g02273 2062 MobiDBLite consensus disorder prediction 2016 2062 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1564 1580 - -
Gma15g02273 2062 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 177 1364 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1712 1739 - -
Gma15g02273 2062 Pfam Protein of unknown function (DUF3223) 1923 1992 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1853 1867 - -
Gma15g02273 2062 Gene3D RNA polymerase ii 334 386 - -
Gma15g02273 2062 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 18 1214 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1288 1310 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1482 1496 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1327 1375 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1679 1711 - -
Gma15g02273 2062 Gene3D RNA polymerase Rpb1, domain 3 467 602 IPR042102 -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1391 1439 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1646 1661 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1288 1895 - -
Gma15g02273 2062 Gene3D - 776 807 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1548 1562 - -
Gma15g02273 2062 Pfam RNA polymerase Rpb1, domain 2 305 458 IPR000722 GO:0003677|GO:0003899|GO:0006351
Gma15g02273 2062 Gene3D - 1902 1997 - -
Gma15g02273 2062 SMART rpolaneu7 188 487 IPR006592 GO:0003677|GO:0003899|GO:0006351
Gma15g02273 2062 Pfam RNA polymerase Rpb1, domain 1 26 262 IPR007080 GO:0003677|GO:0003899|GO:0006351
Gma15g02273 2062 Pfam RNA polymerase Rpb1, domain 5 736 1151 IPR007081 GO:0003677|GO:0003899|GO:0006351
Gma15g02273 2062 Pfam RNA polymerase Rpb1, domain 3 462 606 IPR007066 GO:0003677|GO:0003899|GO:0006351
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1792 1852 - -
Gma15g02273 2062 Gene3D - 302 466 - -
Gma15g02273 2062 MobiDBLite consensus disorder prediction 1614 1628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02273 Gma-Chr15 47529189 47543838 Dispersed/Transposed