Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02221 ATGGAAGACGGCAAGCCCATGAATGGCGGCGACCAAGTCGAGTCTCGCTTCGTCGAGTTCTGCAAGAATGGGCTAGCATTGGAAGAGAAAAGCTGTAAAAAAGCAAAGAATCTGTTTGGTGAAACCAAGCATATTCTACTGTCAAATTTTTCATCAATGGGGAATGGAACGTCTGAAGAAGCAGAGAGGTATTGGTTTGCTTTCATTTTGTACTCTGTCAAGAAATTGATCCAGAAAAATGAGGAGGGTGGGAAGGAAGACGCCGAGAACACTGGGCTTAGTTTGTGCCGTATATTGAGAGCAGCTAAGCTTAACATTGCAGATTTTTTTAAAGAACTTCCACAGTTTGTTGTTAAAGCTGGTCCAACTTTAAGTAATCTATATGGCACAGATTGGGAAAACAGGCTTGAGGCGAAAGAGATGCATGCCAATGCTATTCACTTGAAGATTCTTAGCAAGTACTATAAACGTGTGTTTGGAGAGTTCTTCGTGTCAACTGACACAAATGCTGAAAAAAACTCATCTATTACTGTTCATGCATCTGAATATCATCGATTTGGATGGCTGCTTTTCTTGGCACTTCGTGTACATGCTTTCAGCCGTTTCAAAGACTTGGTGACTTGCACTAATGGTTTGATTTCAATATTGGCCATCTTAATTATCCATGTTCCTACTCGTTTTCGGAATTTCAACATCCATGACTCCTCACGCTTTGTTAAGAAAAGTAACAAAGGTGTGGACCTCCTTGCATCACTTTGCAACATATACAACACTTCTGAAGATGAGTTGAGGAAAACCATGGAGAAAGCCAATAATGTAATAGCAGATATATTGAAGAAGCAGCCTTGCTTGGCATCTGAATGCGAAACCGAAAACCTAGAAAATATCGATAAAGATGGTTTGACCTATTTTAAAGACTTGATGGAAGAATCTTCTCTACCTTCTAGTTTAAATATGCTAGAAAAGGACTATGATTACATGATTCGAAATAAGAGTGAATTGGATGAGAGGTTATTCATTAATGAGGATGACAGCCTATTAGCTTCAGTAAGCTTGTCTGGAGGTTCTGTTTCAGTAGGTGGTGTAAAGAGGAAATTTGATTCAATGGCATCACCTGCTAAAACCATTACAAGTCCACTCTCACCTCACCGCTCCCCCACATCACATACTAATGGCATCCCGGGTAGTGCAAACTCAAAGATGGCAGCCACCCCTGTAAGCACAGCAATGACTACTGCAAAGTGGCTTCGAACTGTCATTTCTCCACTTCCATCGAAGCCCTCGCCAGAGCTGGAACGATTTTTGACATCATGTGATAGGGATGTTACGAGTGATGTGGTTCGCAGAGCACAGATTATATTGCAGGCTATATTTCCTAGTAGTCCTCTTGGAGAACGATGTGTAACCGGAAGCCTGCAAAGTGCAAACCTTATGGACAATATATGGGCTGAACAACGAAGATTGGAAGCACTGAAGTTATACTACAGGGTATTGGAAGCAATGTGCAGAGCAGAAGCCCAAGTATTTCATGCAACTAATTTAACCTCTCTACTTACCAATGAGAGGTTCCATCGGTGTATGCTTGCGTGTTCTGCAGAATTAGTCCTGGCAACTCACAAGACTGTAACAATGTTGTTCCCTGCAGTACTAGAGAGGACTGGAATTACAGCCTTTGATCTTAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCTCTCCCAAGAGAATTGAGGCGACATCTGAATTCATTGGAAGAACGACTTTTGGAGAGCATGGTATGGGAAAAGGGTTCTTCAATGTATAACTCTTTGGCAGTTGCCAGACCTTCCCTTTCTGCAGAGATAAATCGTCTTGGACTGTTAGCTGAACCAATGCCATCATTGGATGAAATTGCAATGCATATTAACTTCTCTTGTGGAGGACTGCCACCAGTGCCTACCTTGCCCAAGCTTGAAAGTTCTCCAACTCAGAATGGGGATATCAGATCACCAAAGCGAAATGTTTTAATGGAAAGAAATTCTTTCACTTCACCAGTGAAAGATCGCCTTCTTCCCTTCAACAGCCTTAAGTCAAAACTACCCCCACCTCCTTTGCAGTCAGCATTTGCCAGCCCCACAAAGCCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAACATCTTTTTTGGCAAGATCATTAAGTTGGGAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTACAATTATCTCAGCAGATTAGGGAGAATGTATACTGTCTTTTCCAGCGGATCCTAAATCAATGGACATCTCTCTTTTTCAACCATCATATTGACCAAATCATCTTGTGTTGTTTCTATGGAGTTGCAAAGATTTCACAACTGAACCTAACTTTTAAGGAGATTGTATACAACTACAGAAAGCAACCACATTGCAAAACACAAGTTTTTCGTAGTGTATTTGTTGATTGGTCATTGGCCCGCCGAAATGGGAGAACAGGACAGGATCATGTTGACATCATTACCTTTTACAATGAAATATTCATTCCTTCTGTAAAGCCACTGCTGGTTGAACTTGGCCCTGCTGGACCAACCCCGAAAAGTGATCGCATACCTGAAGTTAATAATAAAAATGAAGGCCATTTAGCTCAATGTCCAGGATCTCCTAAAATATCACCTTTCCCAACCCTTCCTGATATGTCTCCAAAAAAAGTGTCAGCCACACACAATGTATATGTCTCTCCATTACGATCATCCAAGATGGAAGCCCTAATATCACACAGCTCAAAAAGCTATTATGCATGTGTTGGGGAAAGCACTCATGCATATCAGAGCCCTTCAAAAGACCTGACAGCCATCAATAACCGTTTAAATGGCAACCGGAAGGTGAGAGGTCCCCTCAACTTTGATGATGTTGATGTGGGGTTGGTGAGTGATTCTATGGTTGCAAACAGCCTCTATCTGCAGAATGGAAGCTGTGCATCATCATCAGGTGCACCATTGAAATCAGAGCAGCCTGACTCCTAG 3018 0.4201 MEDGKPMNGGDQVESRFVEFCKNGLALEEKSCKKAKNLFGETKHILLSNFSSMGNGTSEEAERYWFAFILYSVKKLIQKNEEGGKEDAENTGLSLCRILRAAKLNIADFFKELPQFVVKAGPTLSNLYGTDWENRLEAKEMHANAIHLKILSKYYKRVFGEFFVSTDTNAEKNSSITVHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTRFRNFNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANNVIADILKKQPCLASECETENLENIDKDGLTYFKDLMEESSLPSSLNMLEKDYDYMIRNKSELDERLFINEDDSLLASVSLSGGSVSVGGVKRKFDSMASPAKTITSPLSPHRSPTSHTNGIPGSANSKMAATPVSTAMTTAKWLRTVISPLPSKPSPELERFLTSCDRDVTSDVVRRAQIILQAIFPSSPLGERCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVFHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPSLSAEINRLGLLAEPMPSLDEIAMHINFSCGGLPPVPTLPKLESSPTQNGDIRSPKRNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNHHIDQIILCCFYGVAKISQLNLTFKEIVYNYRKQPHCKTQVFRSVFVDWSLARRNGRTGQDHVDIITFYNEIFIPSVKPLLVELGPAGPTPKSDRIPEVNNKNEGHLAQCPGSPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSEQPDS 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02221 1005 Pfam Domain of unknown function (DUF3452) 87 222 IPR024599 -
Gma15g02221 1005 Gene3D - 407 595 - -
Gma15g02221 1005 PANTHER BNACNNG22930D PROTEIN 10 992 - -
Gma15g02221 1005 Gene3D - 183 341 - -
Gma15g02221 1005 Gene3D - 684 874 - -
Gma15g02221 1005 Pfam Retinoblastoma-associated protein B domain 723 850 IPR002719 GO:0005634|GO:0051726
Gma15g02221 1005 SUPERFAMILY Cyclin-like 721 862 IPR036915 -
Gma15g02221 1005 SMART RB_A_2 404 605 IPR002720 GO:0005634|GO:0051726
Gma15g02221 1005 Pfam Retinoblastoma-associated protein A domain 404 605 IPR002720 GO:0005634|GO:0051726
Gma15g02221 1005 Coils Coil 260 280 - -
Gma15g02221 1005 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 10 992 IPR028309 GO:0006357|GO:0051726
Gma15g02221 1005 SUPERFAMILY Cyclin-like 412 607 IPR036915 -
Gma15g02221 1005 MobiDBLite consensus disorder prediction 376 400 - -
Gma15g02221 1005 SMART DUF3452_2 74 222 IPR024599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02221 Gma-Chr15 46164787 46172397 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Gma15g02221 RB_A 9.7e-65 CL0065
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01695 13 31915349 31923517 Gma15g02221 15 46164787 46172397 GST