Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02182 ATGTCTCCATCAGCGAAATCAAAATCCAAGTCCCAGGAGAAGGCCTCTGCAAGGGGGGGTAAGGAACAACATAAGACTTCTCCAAAGACTTCCAAGTCTCCAACTCATGGGAGTGGCACTCCTGCTAGTGCACACAATCCCATCTCGGGAACATTTCAAACTCCAGAAACATCATTGGTTGCTTCCTCTACTCAAGTTCATGACAACAGTCATTTCCCAAAAATAGATGATGCAGATGAGCATTCTAGAAGTCCTCAAGGAATGGTGTCTGAATGTGATTCGGTTTCTAACAATGGTAGCTGCTCTGGTGAATCAGAAGAGTCTAAAGAGAAGGTAACAGTAACAAACTCTTCTACTCAGCCAGACAGTATACTTGGTTGTGATAATGATAGAAGGGAGAAGATCCGCTTGAAGAACGAGAGGAAGCACCAGAGGCAGAGGGAAAGGAGAGCACAGGAGTTGCATGACCGTTGTTGCGGGTACCTAATGTCAAGAAAGCTAGAATCACTTGCACAGAAGTTAGTGGCGATGGGGTTCTCTTCTGAGCGAGCGGCGTTGGCCTTAATGTTAAATGACGGAAAATTAGAGCAATCAGTTTCCTGGCTATTTGAAGGGAGTGAAGAACAATCACAAAGCAAGGATACTACTAGCCTTATAAGTGAGGGTAATATGAAAATTGACATACGTGATGAGCTTGCTCAGATATCTGCCCTGGAGGTAAAGTACAGTTGTTCAAAGCAAGAGGTTGAAAGAGCAGTTGTTGCTTGTGAAGGTGATCTTCAAAAGGCAGAAAATACCTTAAGAACACAGAATCAGGAATTTCCTACAACCCAATCGAAGTCAGAAGATTCTGCTCAAAATAATAGTAGTCTGGTGAGATCACAAGGATCACCAGCAGCATCGGTTTCAATGCAGCACAGAGGGAATGAAAATGACTTTAACCATTACAACAGGGTAGGTGGTTCGGATTCCATGTTTCCGGATGTTGAAACCGGGAATGTACATTCTCTACAATCGAATCATCCAAATTTAATGACTGAGAAAAGATGGAGTGGTGTTCCAGGATCAAGCCTGTCTGCTATGTTTGCCATGGCACCATCCATGCAAGCAGTGCCTCCATTTGTTAAAATGGAGGGCGGATGGCCTATTTCCCTTGCAAATGAAGGAAGAATGATTCAACAAGGAGTAGGAAGGGAGCCGGTAATGATGCAACATCCACAATTCACAAATGCCAAACAGAACTCTATGATGTCTTTAAATTCCTTTCCTTCAGGAGCAGCAGGTTGGTATGCAAATAGTATTCCAGGTGCTGACAATGTGAGATCAAATGGGAAGTTACTACAAACTCAAAGCATAAGAAGTGTGAGCCCAAATCATTTGGAGCAATTTTGTCAAGCTCCGTATAGGGAATATTCTCATTTCCTTGGACCAGTAGACTACTCATCTGCTGGAGTGGGTGGTTATTGCAAGCCAATGGGTGCATCATCATCACCTCCACCTACAATTCCTCCTCGGCATCAAGGTTCATGGAGCACGGGCGCGTCTTCACCATCGCTCATGGTGCCAACTTCCCTTGGACTATTTTCTGGTCATCAGAATGCAGCCAGAACATTCAACTCACATTCACACATGGATTGGAACACTGTGGGTTTCATGCCAGAATTTGACTACAGCAGCATAGATTGGAGTTTGAATGCGCCATCTTCTTCCGTGTCGGGTGGACTGTGGCTAGGGATCTCTTCAATGTTGAGAAACAGTTATGGGGATAGGAGGGGCAGTCAATGCATGAGTGGATTGCAAATGGCTAGGGAAACTTCATCATCTGGTGGATTGAGAGAGTGGACCACTCCTTTTGCTGGGAAGGACATATTCAGAGTTCCTAGGCAGTTTGTTACCTCTCCTCCTATGTAG 1911 0.4464 MSPSAKSKSKSQEKASARGGKEQHKTSPKTSKSPTHGSGTPASAHNPISGTFQTPETSLVASSTQVHDNSHFPKIDDADEHSRSPQGMVSECDSVSNNGSCSGESEESKEKVTVTNSSTQPDSILGCDNDRREKIRLKNERKHQRQRERRAQELHDRCCGYLMSRKLESLAQKLVAMGFSSERAALALMLNDGKLEQSVSWLFEGSEEQSQSKDTTSLISEGNMKIDIRDELAQISALEVKYSCSKQEVERAVVACEGDLQKAENTLRTQNQEFPTTQSKSEDSAQNNSSLVRSQGSPAASVSMQHRGNENDFNHYNRVGGSDSMFPDVETGNVHSLQSNHPNLMTEKRWSGVPGSSLSAMFAMAPSMQAVPPFVKMEGGWPISLANEGRMIQQGVGREPVMMQHPQFTNAKQNSMMSLNSFPSGAAGWYANSIPGADNVRSNGKLLQTQSIRSVSPNHLEQFCQAPYREYSHFLGPVDYSSAGVGGYCKPMGASSSPPPTIPPRHQGSWSTGASSPSLMVPTSLGLFSGHQNAARTFNSHSHMDWNTVGFMPEFDYSSIDWSLNAPSSSVSGGLWLGISSMLRNSYGDRRGSQCMSGLQMARETSSSGGLREWTTPFAGKDIFRVPRQFVTSPPM 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02182 636 MobiDBLite consensus disorder prediction 11 29 - -
Gma15g02182 636 Gene3D - 163 212 - -
Gma15g02182 636 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 1 636 - -
Gma15g02182 636 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 165 205 IPR015940 -
Gma15g02182 636 MobiDBLite consensus disorder prediction 87 103 - -
Gma15g02182 636 SMART uba_6 167 204 IPR015940 -
Gma15g02182 636 Coils Coil 246 273 - -
Gma15g02182 636 MobiDBLite consensus disorder prediction 266 304 - -
Gma15g02182 636 Coils Coil 127 147 - -
Gma15g02182 636 MobiDBLite consensus disorder prediction 70 86 - -
Gma15g02182 636 MobiDBLite consensus disorder prediction 30 69 - -
Gma15g02182 636 MobiDBLite consensus disorder prediction 1 150 - -
Gma15g02182 636 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 636 - -
Gma15g02182 636 SUPERFAMILY UBA-like 168 209 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02182 Gma-Chr15 44705518 44707428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02182 4 635 EF-hand Containing Proteins AT5G12120 35.588 1.14e-90 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01670 13 31607638 31611637 Gma15g02182 15 44705518 44707428 GST