Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02165 ATGAGACAAATGAAGATAGATATTGAAGATGAGGTGCTTCCCAATGATATGAGTGGGACACAATTGAATGATGAGAGTTATGAAGGAGGTGCTGGCATTGTTCTGAAGAAAGGGCCATGGACATCAACTGAAGATGATATTTTGGTGGATTATGTCAAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGCACACCGGGTTGTTACGTTGCGGAAAAAGTTGTCGGCTGCGGTGGGCTAATCACCTAAGGCCGAATTTAAAGAAAGGGGCGTTTACCGCAGAAGAGGAGCGGGTGATTGCTGAACTTCATGCCAAAATGGGAAACAAATGGGCACGCATGGCAGCGCATTTGCCTGGTCGCACAGATAATGAGATAAAGAACTACTGGAACACCCGGATCAAAAGGTGTCAAAGGGCTGGGTTGCCACTTTATCCTCCAGAAGTGAGTTTGCAAGCTTTGCAAGAGAGCCAGCATAGCCAAAGCTCTGGTGGACTTAATGGTGGCGAAAAAATGCATCCTGATTTCTTGCAGAAAAACAGTTTTGAGATACATGATGGTATATTTGACAGTCTGAAGGATAATCAGGGAATCTTACCTTATGTGCACGAGCTTTCTGATATTTCTGTTTATGGCAATATGCTAAAAGGTCTTGATTCTTCTCAGTATTGTAGTTTTGTGCCACCAACATTACCTAAGTGTAAGCGTCTTAAAGAGTCAACAATACCATTTATCGATTCCTGTGATATGAAAAAATATGATTTATATTCATTTGATCAAATTCGAGACAATAATTCTAATAAGATTGCACAATCATTTGGAATGCAAGCACCCCTTGATCCTGGTCCCTCCTCGCACAGCTCAATGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCTTATGAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAACTCGATTTAGGTAGCTGGGGTTCATCCCCCCCACCTTCTTTGCTCGAGTCAGTTGATGATTTCCTTCAGTCTCCTACACCAATCAGTACACTGGAGTCAGATTGTTCTTCTCCACAAAATAGTGGCCTGCTGGATGCTTTACTTTATCAGGCAAAGACTATGAGCAGTTCAAAGAACCATTGTTCTGACAAGAGTTCAAATTCTTCTACTGCAACCCCTGGTGACAGAGCTGACAGCTCTGCTTTGAATGTGTACGAGACAGAATGGGAAGATTATGCTGATCCTGTATCTCCCTTTGGTGCAACTTCAATATTGAATGAGTGCACTGGTCTTAGAGCCAATATGAATTCATTGAACGAACAGCTACCAGTTCAGACCATTACTGGCGACCTTCCAAATTTAGAGTCTGTTGACCAGGTTCTGGGCATGGCAAGAACCAGGCTATCAGTACTGATGCTGCAACGGCCTTTCTTGGAGATGATTTAG 1449 0.4334 MRQMKIDIEDEVLPNDMSGTQLNDESYEGGAGIVLKKGPWTSTEDDILVDYVKKHGEGNWNAVQKHTGLLRCGKSCRLRWANHLRPNLKKGAFTAEEERVIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPLYPPEVSLQALQESQHSQSSGGLNGGEKMHPDFLQKNSFEIHDGIFDSLKDNQGILPYVHELSDISVYGNMLKGLDSSQYCSFVPPTLPKCKRLKESTIPFIDSCDMKKYDLYSFDQIRDNNSNKIAQSFGMQAPLDPGPSSHSSMCYSHSLSNGNSSTSKPYEAVKLELPSLQYPELDLGSWGSSPPPSLLESVDDFLQSPTPISTLESDCSSPQNSGLLDALLYQAKTMSSSKNHCSDKSSNSSTATPGDRADSSALNVYETEWEDYADPVSPFGATSILNECTGLRANMNSLNEQLPVQTITGDLPNLESVDQVLGMARTRLSVLMLQRPFLEMI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02165 482 Gene3D - 36 89 - -
Gma15g02165 482 CDD SANT 39 84 IPR001005 -
Gma15g02165 482 SUPERFAMILY Homeodomain-like 36 131 IPR009057 -
Gma15g02165 482 Pfam Myb-like DNA-binding domain 90 133 IPR001005 -
Gma15g02165 482 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Gma15g02165 482 Gene3D - 92 138 - -
Gma15g02165 482 ProSiteProfiles Myb-like domain profile. 35 84 IPR001005 -
Gma15g02165 482 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 461 - -
Gma15g02165 482 CDD SANT 92 133 IPR001005 -
Gma15g02165 482 MobiDBLite consensus disorder prediction 274 304 - -
Gma15g02165 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Gma15g02165 482 SMART sant 36 86 IPR001005 -
Gma15g02165 482 SMART sant 89 137 IPR001005 -
Gma15g02165 482 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Gma15g02165 482 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 461 - -
Gma15g02165 482 MobiDBLite consensus disorder prediction 378 400 - -
Gma15g02165 482 MobiDBLite consensus disorder prediction 282 304 - -
Gma15g02165 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Gma15g02165 482 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02165 Gma-Chr15 44222205 44224929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02165 32 420 MYB Transcription Factor Family AT5G06100 49.250 1.02e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma15g02165 Myb_DNA-binding 8.2e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01660 13 31464941 31475364 Gma15g02165 15 44222205 44224929 GST
Gma04g01155 04 16454365 16457691 Gma15g02165 15 44222205 44224929 PCT
Gma06g02777 06 51607124 51610554 Gma15g02165 15 44222205 44224929 PCT
Gma15g02165 15 44222205 44224929 Gma04g01155 04 16454365 16457691 PCT
Gma15g02165 15 44222205 44224929 Gma06g02777 06 51607124 51610554 PCT