Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02153 ATGGAAGAAGGGTCATGTCAAAACTCAGTTCCTGGTTCAGGTTTTGTTGATAAAACTAGGATTGTAGAGGCTAAACCCCTTCGTAGTTTGGCACCTGTGTTGCCAAAATCTCTTCAATCTTCTCTCTCTGGCCGGTATCCATCTGTGTTTCCTCCATTTGTTTTGTTTGAGGAGCCTCAGGAGTCTCAGCCGTCACCTGCTCCCATGCCGGCTCCAATAAGGTCCTATAGGGACCCACTAGATGAAGAAGAAGCCCCTCATGGAGCCAATGGAGAGACTTCTTCACCTATGGAGGGTCTCAACGGTTGTAATGTTGATGATGGCCAAAAGCGTGTTGTGTTGCCTATGAACAGCTGCAAATCTTCCCAAAAGAGGAGTAAGAAAACTAAGGAGTCACCATTTGATTTGAGTTCTTCGGTTGGTGGTATCAGCATGGCCAAAAGGGAAGATGGCGATCGTGAAGTGGTTAATCTTGTGCTCATGACTTATGATTCTCTTCGTAGAAGGCTTTGCCAAATTGAAGATGCCAAGGAGTTGAACACAACAATGTTAATCAAGCGTGCGGATTTAAGAGCAAGCAATGCGATGACGGGCAAAGCTTTTCGAACAAACATGAGGAGGAGAGTAGGAGCAGTGCCTGGGGTTGAGATTGGGGACATTTTCTTTTTGCGGATGGAAATGTGTCTTGTGGGTTTACATGGTCAGTCAATGAGCGGAATTGACTACATGACTATCAAGGATGAGCTTCAAGAGGAAACGGTGGCTTTAAGCATTGTTTCTTCAGGAGTATATGATAATGATGCAGAGGATAATGATGTTTTAATTTATAGTGGTCAGGGTGAGAACTTCAACAAGAAAGATAAGCACGTGATTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTAGATAGAAGTTCACGACGCCACAATGAAGTAAGAGTCATCCGGGGCTTGAGAGATGCTGCAAACAGAAATGCGAAAATCTATGTCTATGATGGTCTGTATAAAATCCAAGATTCTTGGATAGAAAGAGGGAAGTCTGGTGGCGGTGTATTTAAGTATAAGTTTGTTAGATTGTCCGGACAACCCAGTGCTTTTGCTGTTTGGAAATCAGTTCAGAAGTGGAAAATGGGCTCAAGCACATCTTCAAGGACTGGTCTTATTCTTGCAGACCTCTCTACCGGAGTTGAGAGTATTCCTGTATCACTTGTCAATGAAGTTGATAATGAGAAGGGCCCTTCTTTTTTCACTTATTTTCATTCTCTCAAAGATCCCAAGCCATTCAGTTTACTGCAATCTTCACATGGATGCAACTGTAACAAAACATGTGTCCCTGGAGATTTGAGCTGCTCTTGCATTCAAAGAAATGAAGGTGACTTTCCATATACTGCAAATGGTGTTCTAGTGAGTCGGAAACCATTGGTTCATGAGTGTGGCCCATTGTGCAAGTGTTCTCCTAACTGCAAGAATCGAGTATCCCAGACTGGTTTGAAGCACCAAATGGAAGTGTTCAAAACAAAAGATAGAGGGTGGGGACTTAGATCACTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATTGACGTTGCCAAGGTAAATAAGAATAGGGGATATGATGATGAGTATGTTTTTGATACAAGCCGTATTTATGATCCATTCAAATGGAATTATGAACCTAGCTTATTGGAAGAAATAAGCTCAAATGTCTCTTGTGAGGATTATGATATACCGTCTCCTCTAATTATCAGTTCTAAGAAATTTGGAAATGTGGCTAGATACATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCAGTCTTGTATGCTGAAAATAATCAATCCTTTCTTCACATTGCATTTTTTGCCCTCCGACACATTCCTCCAATGACAGAGTTAACATATGATTATGGATGTTCCATTGCTCATGGACAGACATGGTGCTGGCAAATGTATTCAGGGCTAGAAGAGATGAGGACATTGAATGTGAAGACCGGATACAGCTTGGAAGTTCCAACGTCGTGGATGCTTGCTTCAAAATATAATTGCCTCCTTTATAGGATACACAATGCAATGGTTTTTCAAGCAATAAGCAAACCATTAGGCCAGACTGTAGACAGACCAGGCAACAATCCTTTATCTGAGAGGTATTCAATTATCTACAAGCTACGCATTATCTGTAAGTGCTAA 2208 0.418 MEEGSCQNSVPGSGFVDKTRIVEAKPLRSLAPVLPKSLQSSLSGRYPSVFPPFVLFEEPQESQPSPAPMPAPIRSYRDPLDEEEAPHGANGETSSPMEGLNGCNVDDGQKRVVLPMNSCKSSQKRSKKTKESPFDLSSSVGGISMAKREDGDREVVNLVLMTYDSLRRRLCQIEDAKELNTTMLIKRADLRASNAMTGKAFRTNMRRRVGAVPGVEIGDIFFLRMEMCLVGLHGQSMSGIDYMTIKDELQEETVALSIVSSGVYDNDAEDNDVLIYSGQGENFNKKDKHVIDQKLQRGNLALDRSSRRHNEVRVIRGLRDAANRNAKIYVYDGLYKIQDSWIERGKSGGGVFKYKFVRLSGQPSAFAVWKSVQKWKMGSSTSSRTGLILADLSTGVESIPVSLVNEVDNEKGPSFFTYFHSLKDPKPFSLLQSSHGCNCNKTCVPGDLSCSCIQRNEGDFPYTANGVLVSRKPLVHECGPLCKCSPNCKNRVSQTGLKHQMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVIDVAKVNKNRGYDDEYVFDTSRIYDPFKWNYEPSLLEEISSNVSCEDYDIPSPLIISSKKFGNVARYMNHSCSPNVFWQPVLYAENNQSFLHIAFFALRHIPPMTELTYDYGCSIAHGQTWCWQMYSGLEEMRTLNVKTGYSLEVPTSWMLASKYNCLLYRIHNAMVFQAISKPLGQTVDRPGNNPLSERYSIIYKLRIICKC 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02153 735 SUPERFAMILY PUA domain-like 192 380 IPR015947 -
Gma15g02153 735 ProSiteProfiles SET domain profile. 499 644 IPR001214 GO:0005515
Gma15g02153 735 SUPERFAMILY SET domain 383 649 IPR046341 -
Gma15g02153 735 MobiDBLite consensus disorder prediction 59 107 - -
Gma15g02153 735 Pfam SAD/SRA domain 209 362 IPR003105 -
Gma15g02153 735 Pfam SET domain 510 644 IPR001214 GO:0005515
Gma15g02153 735 ProSiteProfiles Pre-SET domain profile. 435 496 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma15g02153 735 Gene3D SET domain 367 651 IPR046341 -
Gma15g02153 735 SMART G9a_1 205 362 IPR003105 -
Gma15g02153 735 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 701 IPR025794 GO:0016571
Gma15g02153 735 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 14 650 - -
Gma15g02153 735 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 14 650 - -
Gma15g02153 735 Pfam Pre-SET motif 393 491 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma15g02153 735 ProSiteProfiles YDG domain profile. 210 358 IPR003105 -
Gma15g02153 735 MobiDBLite consensus disorder prediction 118 137 - -
Gma15g02153 735 Gene3D - 208 366 IPR036987 -
Gma15g02153 735 SMART preset_2 389 483 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma15g02153 735 SMART set_7 499 650 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02153 Gma-Chr15 43616747 43630838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02153 8 654 Su(var)3-9 homologs AT1G73100 50.514 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma15g02153 SAD_SRA 1.9e-46 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01655 13 31390494 31396301 Gma15g02153 15 43616747 43630838 GST
Gma04g01153 04 16274760 16278562 Gma15g02153 15 43616747 43630838 PCT
Gma15g02153 15 43616747 43630838 Gma04g01153 04 16274760 16278562 PCT