Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02149 ATGTCCTTCTTCAAATTTTACGGCAAGGTCGATGAAGCGGAGCACGCCATGCTCGAAGCTCGCCGCAAAACGCGAAAGCGAGTCACCATCATAGCCTTGTCCACAATAGTCCTCGTCGGAGTTGTGTGTGCTGCTGTATTTGGAACCGTTGCACACAACAACAACAACTCAAATAATGATGGTGTAAATAATGCACCATCTCTTTCCAATTCAGTGAAGGCTGTTTGTGACGTGACACTTTACAAGGGCGCGTGCTACAGTAGCCTTGGTCCTCTTGTGCACTCGGGTCAGGTTCGACCTGAGGAGTTGTTCTTGCTGTCTATTGAAGTTGCCCTAGCTGAGGCTTCAAGGGCTGTTGAGTATTTCTCTCAGAAGGGAGTTTTTAATGGCTTGAATGTTGATAATAGGACCATGGAGGGGTTTAAGAACTGCAAGGATCTTTTGGGTCTTGCGGTTGATCATTTGAATAGCTCTTTGGCTTCTGGGGGGAAATCTTCGTTGTTTGATGTCTTGGAGGATCTTAGAACATGGTTGAGTGCTGCAGGTACTTACCAGCAAACTTGCATTGATGGCCTTGAAGAGGCAAAAGAAGCCCTGAAGACCAGTGTTGTAAACAATCTAAAAAATTCTACAGAGTTCACCAGTAACAGTCTTGCCATTGTTACTTGGCTCAACAAGGCTGCAAGCACAGTGAACTTGAGGCGCTTGTTGAGTACTTTGCCACATCATATGGTAGAACCAAAGTGGCTTCATTCTAAAGACCGGAAGCTGCTTCAAAAAGATGATTTGAAGAGGAAAGCTCACATTGTTGTAGCAAAAGATGACAGCGGGAAATTTAAAACAATCACCGCTGCACTTAAACAAGTCCCTGATAATAGTGACAAGAGGACTGTGATCTATGTGAAGAAAGGAGTTTACGATGAAAATGTGAGAGTGGAGAAGACTAAATGGAATGTCATGATCATTGGTGATGGCATGAATGCCACAATTGTATCTGGAAGCCTTAACTTTGTGGATGGCACCCCAACATTTTCAACCGCAACATTTGCTGTGTTTGGGAGGAATTTCATTGCTAGGGATATGGGATTTCGCAACACAGCTGGTCCACAGAAGCAACAGGCAGTGGCACTGATGACAAGTGCTGATCAAGCAGTTTATTACAGGTGCCAAATTGATGCATTTCAGGACTCTCTTTATGCTCATTCCAACCGCCAATTTTACAGAGAATGCAACATCTATGGCACAGTTGATTTCATTTTTGGCAATTCAGCAGTAGTCCTCCAAAACTGTAACATTATGCCAAGGGTGCCTATGCAGGGCCAGCAGAACACCATAACAGCACAGGGAAAAACTGACCCCAACATGAACACAGGAATTTCAATTCAAAATTGCAACATTACACCCTTTGGGGACTTGAGTTCTGTGAAAACATATCTTGGAAGACCCTGGAAGAACTACTCAACCACAGTGTTTATGCAATCCACAATGGGGAGTTTCATTCACCCAAATGGATGGTTACCATGGGTAGGGAACTCAGCACCAGATACCATATTTTATGCAGAATTTCAGAATGTTGGACCAGGTGCTTCAACAAAGAATAGAGTGAACTGGAAGGGTTTGAGAGTCATTACAAGGAAACAAGCTAGCATGTTTACTGTCAAGGCTTTTCTTTCAGGGGAGAGATGGATTACAGCTTCTGGTGCCCCCTTTAAATCTTCCATATGA 1725 0.4383 MSFFKFYGKVDEAEHAMLEARRKTRKRVTIIALSTIVLVGVVCAAVFGTVAHNNNNSNNDGVNNAPSLSNSVKAVCDVTLYKGACYSSLGPLVHSGQVRPEELFLLSIEVALAEASRAVEYFSQKGVFNGLNVDNRTMEGFKNCKDLLGLAVDHLNSSLASGGKSSLFDVLEDLRTWLSAAGTYQQTCIDGLEEAKEALKTSVVNNLKNSTEFTSNSLAIVTWLNKAASTVNLRRLLSTLPHHMVEPKWLHSKDRKLLQKDDLKRKAHIVVAKDDSGKFKTITAALKQVPDNSDKRTVIYVKKGVYDENVRVEKTKWNVMIIGDGMNATIVSGSLNFVDGTPTFSTATFAVFGRNFIARDMGFRNTAGPQKQQAVALMTSADQAVYYRCQIDAFQDSLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNIMPRVPMQGQQNTITAQGKTDPNMNTGISIQNCNITPFGDLSSVKTYLGRPWKNYSTTVFMQSTMGSFIHPNGWLPWVGNSAPDTIFYAEFQNVGPGASTKNRVNWKGLRVITRKQASMFTVKAFLSGERWITASGAPFKSSI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02149 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 226 IPR035513 -
Gma15g02149 574 CDD PMEI-like_3 74 226 - -
Gma15g02149 574 Pfam Pectinesterase 268 559 IPR000070 GO:0030599|GO:0042545
Gma15g02149 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 68 224 IPR006501 GO:0004857
Gma15g02149 574 SMART PMEI_2 67 220 IPR006501 GO:0004857
Gma15g02149 574 Pfam Plant invertase/pectin methylesterase inhibitor 71 220 IPR006501 GO:0004857
Gma15g02149 574 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Gma15g02149 574 Gene3D - 263 574 IPR012334 -
Gma15g02149 574 ProSitePatterns Pectinesterase signature 1. 293 312 IPR018040 -
Gma15g02149 574 SUPERFAMILY Pectin lyase-like 266 570 IPR011050 -
Gma15g02149 574 PANTHER PECTINESTERASE 5 572 - -
Gma15g02149 574 PANTHER PECTINESTERASE 5 572 - -
Gma15g02149 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 224 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02149 Gma-Chr15 43538759 43541977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02149 7 574 Carbohydrate Esterase AT3G10710 57.719 0.0 677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01650 13 31323731 31327709 Gma15g02149 15 43538759 43541977 GST
Gma06g02791 06 51764356 51767471 Gma15g02149 15 43538759 43541977 PCT
Gma15g02149 15 43538759 43541977 Gma06g02791 06 51764356 51767471 PCT