Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02055 ATGAATGGACTTGAAGAATCAACTAACAATGAAGTAGATGTTCCTTTGAATGAAGTATCTAACAAACTGATTGATCCACACAAATATGGTTATGGTACTCCAAACTTGAATAAAAATACTACACTGAAACTGGTGCCTAAAGTAGTTCATAGGACTAATGAACACAGGAATGCTAAAAGAGAAATTGATCATCAAGAAAAAGTTTTCAAGAAGCCAGACAAGGTCCTGCCATGTCCTCGTTGCAATAGTTTGGAAACAAAGTTTTGCTACTTCAACAATTACAATGTTAACCAACCTAGGCATTTCTGCAAAAATTGCCAAAGGTATTGGACCGCTGGGGGGACGATTAGAAACATTCCTGTTGGGACTGGCAAGCGTAAGAATAAGCACTCGGCTCAGTATTGTCAGATACCTATGACTCCTGATGCTGCATCTGTGATCCAGACAGATTCTAAACCTGCTAGTGATATGCTTCTCTTATCTAATGAACTTCCTGTGACTTCAAGACCTATCAAAGGAGGGGAGGAAACTCCTCTTAGTGAATCTTTAGAAACTGTGTTAAGTCTCAATGGCCTGACAAAGATTGAAGTGGACTCCTCCACTCTCAAAGATGATGATGATGAGGAGCCTTCCAGCTCTTCTATGAGATCTAGTGAAATAGAGCAGCTTGGTTTGCCACAACACTCTAATGGTTTAGTTCCTTTACATTCATTTTATTATTATCATGTTCCTTCATGGCCTTACCAATGGAATCCATGTTGGAATGTCAAGGAGTTTAGGCCTAGTAACATCAGTTCTAGAGCTGTTTACACCGATTCTTCAACTATGATGGCAGTTCCTGGCTTCTCCATACCAACAGTAATACTTCCAGGGGTGCCTTATTCGTATTCGGGTTTTATGTCAAGCTGGGCTGAGCAAAAAGAAGAGGCTTCATTGGTTGGATCTGCATTTAGTGGCATCTCATTGTCTTCATGTTCAGTTAGCAACAGCACTTGTTCGGGTAATAGGTCCCCAACCTTGGGAAAACATCCTAGAGATGGAAGTACACCGGGGGAAGATGCAATGAAACAGAATCTTTGGGTGCCTAAGACTGTAAGAATTAATGACCCAGAAGAGGCAGCAAATAGTTCTATATGGTCAACTTTGGGGACAAAGTCTGAACAGAACAAATTCATTATGAAAGGAAGTGTTTTTAAATCATTTGAACCAAAGTCACAGGCCAGTCCTCATATTTTAGATGATAATCAAATTCTAAGGGCTAACCCTGCTGCTTTCTCGCGCTCTGAATCTTTTCAGGAAAGAATGTAA 1308 0.4029 MNGLEESTNNEVDVPLNEVSNKLIDPHKYGYGTPNLNKNTTLKLVPKVVHRTNEHRNAKREIDHQEKVFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNIPVGTGKRKNKHSAQYCQIPMTPDAASVIQTDSKPASDMLLLSNELPVTSRPIKGGEETPLSESLETVLSLNGLTKIEVDSSTLKDDDDEEPSSSSMRSSEIEQLGLPQHSNGLVPLHSFYYYHVPSWPYQWNPCWNVKEFRPSNISSRAVYTDSSTMMAVPGFSIPTVILPGVPYSYSGFMSSWAEQKEEASLVGSAFSGISLSSCSVSNSTCSGNRSPTLGKHPRDGSTPGEDAMKQNLWVPKTVRINDPEEAANSSIWSTLGTKSEQNKFIMKGSVFKSFEPKSQASPHILDDNQILRANPAAFSRSESFQERM 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02055 435 MobiDBLite consensus disorder prediction 198 222 - -
Gma15g02055 435 Pfam Dof domain, zinc finger 73 130 IPR003851 GO:0003677|GO:0006355
Gma15g02055 435 ProSiteProfiles Zinc finger Dof-type profile. 76 130 IPR003851 GO:0003677|GO:0006355
Gma15g02055 435 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 2 435 - -
Gma15g02055 435 MobiDBLite consensus disorder prediction 198 214 - -
Gma15g02055 435 PANTHER CYCLIC DOF FACTOR 2 2 435 IPR045174 GO:0003700|GO:0006355
Gma15g02055 435 ProSitePatterns Zinc finger Dof-type signature. 78 114 IPR003851 GO:0003677|GO:0006355
Gma15g02055 435 MobiDBLite consensus disorder prediction 331 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02055 Gma-Chr15 37197522 37199961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02055 65 433 C2C2-Dof Transcription Factor Family AT5G39660 36.788 1.43e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma15g02055 zf-Dof 8.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02055 - - gmx:102666857 862.448