Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02050 ATGATGAAGTTGTCCATGAGAAGCACTGATGAGAAGCATCAAAACAAAGGACTTAAGAGCACTACTCAGTATGACCTTGGACAAAACACTAACACAACATCAACTAAACTTCCACTAAGTCTTTCTAAAGGATCAGTGACAGAGAGAGATAACAAACGAGCTATTTGCAAACAAGTTTTGGCTTCCAAAAGTACAAGGCTACTAGTAGATAAGATAAGGCCTGAAGTTGAACCAATGGATTGTTCAGCTGCTAGAAAAACACAAAAGGCTGACCGAGAAAAGTTAAGGAGGGATCGAATCAATGAACAGTTCGTAGAATTGGGTAACATTTTAGACCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTGTGTGATACAATTCAATTGCTGAAGGACCTAATTTCTCAAGTTAGTAAACTCAAAGATGAATATGCTATGCTAAATGAAGAATCTCGTGAGTTGACTCTAGAGAAAACTGATCTCAGGGAAGAGAAGGCTTCTCTTAAATCAGATATTGACAACTTGAATAATCAGTATCAGCAGCAGCTCAGGACCATGTTTCCATGGACTGCAATGGAGCATTCAGTTATGATGGCTCCATCATCGTATCCATATCCAGTGCCAATGGCAGTACCTCCTGGTCCAATTCCCATGCAGCCATACCCCTTCTTTGCTAATCAACATCCTGCAGTCATCTCCAACCCCTGTTCAACTTATGTTCCTTATTTAGCCCCCAATACCATTGTTGAACAACAATCCACCCTGTACGTATCCCCTCCACTTCATCCAGGTGCTCGGCCCAATGTGTCAGGAAAACAAGAGTCCAAGAGCAAGTCATCCAGGGAGAGCATGGCTGAAAAGAATGAGGAATCTAATGATGTCACTACAGACCTTGAGTTGAAGACTCCTGGGTCTTCTGCAGATCAGGATTTATCATCTGGACAAAGAAAATCTAGCAAGTTGTCAAGGAGGGAAAGCAGCTGCACTGAATGGAGTTCATTAGCTGCTGAAGTTTTTCATTGTGCATCTGCTGCAACTCTGGAGAATCGAGATTCGGCACAAGTTGTCGCTCATACAATATATGCACCATTTGGCTACATGCACCTCACAATATTATGTGGCTCCTAA 1131 0.4209 MMKLSMRSTDEKHQNKGLKSTTQYDLGQNTNTTSTKLPLSLSKGSVTERDNKRAICKQVLASKSTRLLVDKIRPEVEPMDCSAARKTQKADREKLRRDRINEQFVELGNILDPDRPKNDKATILCDTIQLLKDLISQVSKLKDEYAMLNEESRELTLEKTDLREEKASLKSDIDNLNNQYQQQLRTMFPWTAMEHSVMMAPSSYPYPVPMAVPPGPIPMQPYPFFANQHPAVISNPCSTYVPYLAPNTIVEQQSTLYVSPPLHPGARPNVSGKQESKSKSSRESMAEKNEESNDVTTDLELKTPGSSADQDLSSGQRKSSKLSRRESSCTEWSSLAAEVFHCASAATLENRDSAQVVAHTIYAPFGYMHLTILCGS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02050 376 MobiDBLite consensus disorder prediction 298 317 - -
Gma15g02050 376 SMART finulus 90 140 IPR011598 GO:0046983
Gma15g02050 376 CDD bHLH_AtILR3_like 89 163 - -
Gma15g02050 376 Coils Coil 131 186 - -
Gma15g02050 376 PANTHER TRANSCRIPTION FACTOR BHLH121 55 357 IPR044579 GO:0003700|GO:0055072
Gma15g02050 376 MobiDBLite consensus disorder prediction 19 45 - -
Gma15g02050 376 PANTHER TRANSCRIPTION FACTOR BHLH121 55 357 - -
Gma15g02050 376 MobiDBLite consensus disorder prediction 1 18 - -
Gma15g02050 376 MobiDBLite consensus disorder prediction 1 45 - -
Gma15g02050 376 MobiDBLite consensus disorder prediction 259 324 - -
Gma15g02050 376 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 134 IPR011598 GO:0046983
Gma15g02050 376 Pfam Helix-loop-helix DNA-binding domain 85 134 IPR011598 GO:0046983
Gma15g02050 376 MobiDBLite consensus disorder prediction 276 297 - -
Gma15g02050 376 Gene3D - 83 160 IPR036638 GO:0046983
Gma15g02050 376 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 154 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02050 Gma-Chr15 36769981 36776858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02050 55 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 58.333 2.35e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g02050 HLH 9.8e-09 No_clan