Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02039 ATGAACCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTCACACAACAAGAATCTGCATCAAATACCAACAGGATTGTTGGGACATATGGCTACATGTCTCCAGAATATGCCATGGAAGGAACTTTCGCTACAAAGTCGGATGTCTATAGCTTTGGAGTTCTGCTGCTGGAAATTGTTAGTGGAAGAAAAAACACTAGCTTTTATGATGATGACCGTCCATTAAACCTAATAGGACATGTATGGGAATTATGGAAAGATGGCAAATATCTTCAATTAGTGGATCCATCATTAAATGAGTTGTTTGATCGCGATGAAGTGCAAAGTCTTGAATGGGAACCCAAGGGACAAGAACTGGTCATAAGGAGACGCGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAGAAACAACAGATTTGAGTACATTCCGGAGGAAGCACAACGCATGTTGAAGTACACTATTGTGTCTAATGGGGATGAAGACTCCTTCTCTTTCAACTCTACGAATGACAAGCTTACACCACGGTGGTTTTTTGGGGAAAGTGGGCGGTTATCTTGCAACGGAAGATATGTAAAGGCTGATCTGTGTTATGGATATACCAACACTGGAGGGTGCCAAAGATGGCAAGATTTACCAAAGTGTAGGAATCCTGGCGATTTGTTTGTGAAAAAGACTCTTGTCCCCGATTATGAAAGTGTAAGTTACGAAACAAATCCGGCTTTTGGCTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTAGTTGCGATGGATTCAGAGCATTCTGGAGGAATGAAACTGGATGTAAATTCTATCATTGGAATTCATCGAAAAATTATATTGTTGACACTAGTGTTGCTGGTGTAGAGTTTTACATGCTGGAGAACACAGGCAACATAACCCCACATAACGGTAAGTCGAATGTCAAATTTCCTGTGGATTTTGTTTTTGGACTACTTCCATAG 966 0.4089 MNPKISDFGMARMFTQQESASNTNRIVGTYGYMSPEYAMEGTFATKSDVYSFGVLLLEIVSGRKNTSFYDDDRPLNLIGHVWELWKDGKYLQLVDPSLNELFDRDEVQSLEWEPKGQELVIRRRGKVCWRSGKLRNNRFEYIPEEAQRMLKYTIVSNGDEDSFSFNSTNDKLTPRWFFGESGRLSCNGRYVKADLCYGYTNTGGCQRWQDLPKCRNPGDLFVKKTLVPDYESVSYETNPAFGYSDCEASCWSNCSCDGFRAFWRNETGCKFYHWNSSKNYIVDTSVAGVEFYMLENTGNITPHNGKSNVKFPVDFVFGLLP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02039 321 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 112 283 - -
Gma15g02039 321 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 107 - -
Gma15g02039 321 SUPERFAMILY Protein kinase-like (PK-like) 2 107 IPR011009 -
Gma15g02039 321 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02039 321 Pfam Protein tyrosine and serine/threonine kinase 4 66 IPR001245 GO:0004672|GO:0006468
Gma15g02039 321 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 107 - -
Gma15g02039 321 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Gma15g02039 321 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 112 283 - -
Gma15g02039 321 Pfam PAN-like domain 219 272 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02039 Gma-Chr15 36058208 36062710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02039 1 107 Receptor kinase-like Gene Family AT4G11530 61.111 5.62e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma15g02039 PAN_2 0.00011 CL0168